Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 AL592429.1-201ENST00000403909 1473 ntBASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO3Q9BXY4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 RPS6P23-201ENST00000413224 722 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC016769.2-201ENST00000414815 475 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC009784.1-201ENST00000426484 460 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 CDY8P-201ENST00000428380 1279 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 CDY20P-201ENST00000447528 1279 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC011411.1-201ENST00000509592 876 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 MRPS16P1-201ENST00000523462 412 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC079064.1-201ENST00000528365 362 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AP000894.4-201ENST00000610185 483 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AC007786.3-201ENST00000615154 596 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AL449283.1-201ENST00000602631 3403 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 AL359715.3-201ENST00000569267 2123 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO3Q9BXY4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC005261.2-201ENST00000593427 4258 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 RNF10P1-201ENST00000418589 369 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 RPS27AP6-201ENST00000427962 448 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 RPL5P2-201ENST00000429598 854 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 REG1CP-206ENST00000447469 496 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 GLUD1P3-202ENST00000508551 200 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC091912.1-201ENST00000511351 248 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AP003396.4-201ENST00000527574 265 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC108865.2-201ENST00000606881 432 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 AC021766.1-201ENST00000624404 741 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms