Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 LDHAP2-201ENST00000437325 985 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC104634.1-201ENST00000452720 462 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 COX6B1P5-201ENST00000509843 249 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 EIF3KP3-201ENST00000514461 639 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC024589.2-201ENST00000605642 1294 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AL078621.3-201ENST00000623707 2042 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 SACS-202ENST00000402364 15134 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNU4-39P-201ENST00000362455 127 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC093720.1-201ENST00000505681 714 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 MIR4311-201ENST00000580794 100 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC245389.1-201ENST00000605141 529 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AL391358.1-201ENST00000605342 190 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AP003119.3-201ENST00000566747 4192 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AL353795.3-201ENST00000624351 5702 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 RN7SKP149-201ENST00000363008 344 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 RPL7P57-201ENST00000423238 740 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 NPM1P33-201ENST00000438918 872 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC092106.1-201ENST00000444291 373 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ABCA11P-202ENST00000504019 2110 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AL731556.1-201ENST00000394628 3711 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AP002991.2-201ENST00000623807 2801 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC079741.1-201ENST00000321498 212 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 RNA5SP332-201ENST00000391063 115 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC007559.1-201ENST00000428736 355 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AL359073.1-201ENST00000448036 403 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 SNORA84-201ENST00000459229 133 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 AC020765.1-201ENST00000604296 328 ntBASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.57□□□□□ -1.68
CSMD1Q96PZ7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms