Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RNA5SP30-201ENST00000365552 115 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RN7SKP279-201ENST00000411383 298 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 OR6E1P-201ENST00000414424 923 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 CYCSP22-201ENST00000517555 339 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC060780.2-201ENST00000589047 198 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AP001267.4-201ENST00000602598 545 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC025574.2-201ENST00000615621 514 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC009962.1-201ENST00000567327 3813 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 GAPDHP24-201ENST00000328713 983 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RN7SKP160-201ENST00000363804 340 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 SNORA16A-201ENST00000384342 137 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RPS7P6-201ENST00000485777 579 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC009120.1-201ENST00000493458 473 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RN7SL466P-201ENST00000497546 295 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC078899.1-201ENST00000521432 1185 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC027026.1-201ENST00000532323 742 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC006206.1-201ENST00000544842 3387 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RBM22P1-201ENST00000578589 1214 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC005244.1-201ENST00000582566 339 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC079395.2-201ENST00000610982 737 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC245014.3-201ENST00000618589 347 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AP001784.1-201ENST00000624107 428 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 AC027279.4-201ENST00000624371 2072 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AL117339.4-201ENST00000608335 7063 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AL159987.1-201ENST00000347911 293 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 RNA5SP131-201ENST00000365452 119 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 NIFKP3-201ENST00000417799 865 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC073850.1-201ENST00000449243 255 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 OR2AO1P-201ENST00000476497 403 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 GAPDHP62-201ENST00000515313 990 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CDH12P4-201ENST00000517835 295 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CDH12P3-201ENST00000517935 295 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CDH12P1-201ENST00000518435 295 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 SUMO2P19-201ENST00000518920 295 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 OR8G3P-201ENST00000533406 921 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AL445222.1-201ENST00000607259 628 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms