Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RN7SKP286-201ENST00000410894 299 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RMRPP5-201ENST00000411156 267 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RN7SKP279-201ENST00000411383 298 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RPS6P23-201ENST00000413224 722 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AP000281.1-201ENST00000444036 316 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 MEMO1P4-201ENST00000453590 386 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AC109481.1-201ENST00000509173 282 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AC097486.1-201ENST00000515331 210 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AC021733.2-201ENST00000518830 497 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 IGBP1P1-201ENST00000554337 1009 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AP001267.4-201ENST00000602598 545 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AL583832.1-201ENST00000603227 784 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 NANOGP3-201ENST00000605855 286 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RN7SL787P-201ENST00000613000 284 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RN7SKP69-201ENST00000365390 305 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RNA5SP131-201ENST00000365452 119 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RNU6-167P-201ENST00000384292 106 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC087752.1-201ENST00000391360 558 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RPL11P3-201ENST00000395256 523 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 OR2AT2P-201ENST00000413438 905 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 SDHDP6-201ENST00000414693 480 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC113412.1-201ENST00000425840 504 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RPL5P2-201ENST00000429598 854 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 Z84478.1-201ENST00000438230 1219 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC002504.1-201ENST00000438281 691 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC005297.1-201ENST00000444765 862 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC087672.1-201ENST00000479876 766 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 RPS7P6-201ENST00000485777 579 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC104109.1-201ENST00000498563 436 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 OR51A1P-201ENST00000511110 946 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC139697.1-201ENST00000548429 745 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC020978.7-201ENST00000575953 1187 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC125494.2-201ENST00000602431 657 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC008691.1-209ENST00000642094 814 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 YES1P1-201ENST00000418510 1628 ntBASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C9orf40Q8IXQ3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms