Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTR9Q6PD62 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTR9Q6PD62 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTR9Q6PD62 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.88□□□□□ -1.31
CTR9Q6PD62 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTR9Q6PD62 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTR9Q6PD62 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CTR9Q6PD62 RNA5SP242-201ENST00000364171 118 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 GNG5P2-201ENST00000372054 207 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 RNA5SP178-201ENST00000410380 128 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 RN7SKP17-201ENST00000411242 351 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 SDHDP6-201ENST00000414693 480 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 RPL34P3-201ENST00000421454 338 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AL022331.1-201ENST00000429025 477 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CTR9Q6PD62 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC096775.1-201ENST00000437724 448 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 OR2AF1P-201ENST00000454899 889 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC006539.1-201ENST00000481419 501 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC022215.1-201ENST00000481770 362 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 DEFB109A-201ENST00000482450 265 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 TRBV5-2-201ENST00000489095 273 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 SNORA43.3-201ENST00000517240 103 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 TMEM97P2-201ENST00000517841 403 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 HMGB1P42-201ENST00000532126 553 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC011445.2-201ENST00000599274 173 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC069234.4-201ENST00000621276 412 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CTR9Q6PD62 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 MFSD8-239ENST00000641590 2479 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CTR9Q6PD62 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CTR9Q6PD62 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.87□□□□□ -1.31
CTR9Q6PD62 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MRE11P1-201ENST00000464884 2127 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MIR323B-201ENST00000385269 82 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 RPL23AP17-201ENST00000401064 499 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 RN7SKP286-201ENST00000410894 299 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC002504.1-201ENST00000438281 691 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 LRRC37A14P-201ENST00000452297 462 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 OSTCP1-201ENST00000455507 450 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 RN7SL717P-201ENST00000478343 297 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ASNSP4-201ENST00000511103 447 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MRPS16P1-201ENST00000523462 412 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 ADAM3B-201ENST00000569937 840 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC019322.1-201ENST00000571869 389 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 SNORD95-201ENST00000579879 68 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 RN7SL753P-201ENST00000581238 290 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC063977.5-201ENST00000601044 974 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms