Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 AC069542.2-201ENST00000624816 216 ntBASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 GTF2IP4-201ENST00000453092 2054 ntBASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RFWD3Q6PCD5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFWD3Q6PCD5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AL159987.1-201ENST00000347911 293 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 RNA5SP242-201ENST00000364171 118 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 RNA5SP178-201ENST00000410380 128 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 RN7SKP286-201ENST00000410894 299 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC099670.2-201ENST00000435130 321 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AL590399.4-201ENST00000436561 601 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 RPSAP41-201ENST00000439695 860 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC006539.1-201ENST00000481419 501 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC022215.1-201ENST00000481770 362 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 USP9YP2-201ENST00000504503 1000 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 USP9YP1-201ENST00000513521 1002 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC021678.3-201ENST00000517893 476 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 HMGB1P42-201ENST00000532126 553 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 MIR4260-201ENST00000583107 67 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFWD3Q6PCD5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 CHEK2P5-201ENST00000423877 246 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 EEF1B2P6-201ENST00000445713 673 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC109481.1-201ENST00000509173 282 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 SNORA43.3-201ENST00000517240 103 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC096996.1-201ENST00000563813 325 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 SNORD95-201ENST00000579879 68 ntBASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.95□□□□□ -1.46
RFWD3Q6PCD5 RNA5SP440-201ENST00000612665 119 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms