Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.77□□□□□ -1
RC3H1Q5TC82 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC020978.8-201ENST00000571975 3022 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ZNF806-201ENST00000438300 1774 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 Y_RNA.256-201ENST00000364594 104 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RN7SKP237-201ENST00000364663 301 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RNU6-413P-201ENST00000384115 107 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 U6.112-201ENST00000384129 70 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RNA5SP122-201ENST00000384457 108 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RNA5SP431-201ENST00000410312 120 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RNA5SP115-201ENST00000411160 107 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC009237.5-201ENST00000414271 501 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RPL17P17-201ENST00000419491 557 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL645939.3-201ENST00000435408 225 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ARL5AP3-201ENST00000439327 386 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 Z99127.2-201ENST00000441426 334 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ST13P20-201ENST00000447996 1065 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RN7SL362P-201ENST00000494228 267 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 SNX18P23-201ENST00000510867 677 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 SEC11B-201ENST00000518383 499 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 OR5AK3P-201ENST00000527486 1297 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC006512.2-201ENST00000543250 486 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC006539.2-201ENST00000601729 572 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC091133.5-201ENST00000603088 301 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL049840.6-201ENST00000604583 345 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC025594.3-201ENST00000613068 790 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 UBE2Q2P2-203ENST00000613592 761 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 MIR6721-201ENST00000617181 87 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AL354702.2-202ENST00000641481 890 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 OR5H6-203ENST00000642105 978 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC017104.4-201ENST00000636283 1592 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 AC131971.1-201ENST00000332881 1482 ntBASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RC3H1Q5TC82 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 SNORA63-201ENST00000363450 132 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 RNA5SP172-201ENST00000365061 118 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 RNU6-1009P-201ENST00000390996 107 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 RNA5SP474-201ENST00000391234 90 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 PSMA6P1-201ENST00000400275 741 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL590128.1-201ENST00000433407 286 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms