Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 SNORA43.1-201ENST00000364863 140 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AL034403.1-201ENST00000399414 885 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AL391422.1-201ENST00000402155 436 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC112492.2-201ENST00000432774 1030 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AL731534.1-201ENST00000434711 269 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC013403.1-201ENST00000436954 263 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 EMC3-AS1-205ENST00000438698 534 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 CXCR2P1-202ENST00000443392 1074 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC245291.3-201ENST00000443400 292 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 OR2L9P-201ENST00000444456 913 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AL133351.3-201ENST00000454998 193 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC010468.3-201ENST00000508225 458 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC026898.1-201ENST00000586404 571 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC010503.3-201ENST00000594355 540 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC016542.1-201ENST00000608259 493 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC022106.1-201ENST00000612834 766 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC006249.1-201ENST00000621223 471 ntBASIC6.29□□□□□ -1.4
CCDC38Q502W7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC38Q502W7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC38Q502W7 CASC19-246ENST00000641625 1606 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC010266.2-201ENST00000564741 3255 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AP005435.3-201ENST00000531260 3198 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 SNORD1C-201ENST00000363315 78 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RN7SKP121-201ENST00000410842 305 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RPS26P13-201ENST00000419030 330 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL360013.1-201ENST00000419031 858 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 GAPDHP19-201ENST00000431768 1005 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 IGLV3-4-201ENST00000432300 244 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 RPS3AP38-201ENST00000435889 763 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RPL12P49-201ENST00000441100 121 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 CYCSP51-201ENST00000443545 318 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RAB28P2-201ENST00000454299 641 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 RN7SL393P-201ENST00000463588 296 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC108729.2-201ENST00000476543 840 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 RN7SL326P-201ENST00000477493 296 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC091544.1-201ENST00000484702 348 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 OR4D12P-201ENST00000509361 911 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC138517.1-201ENST00000515724 568 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms