Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC006213.6-201ENST00000623722 4179 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC034229.2-201ENST00000566945 2508 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
NKX6-1P78426 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 METTL21EP-201ENST00000298105 713 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 ANKRD36P1-201ENST00000344424 659 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-1320P-201ENST00000390838 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 Y_RNA.578-201ENST00000390903 88 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-1269P-201ENST00000391139 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC005522.1-201ENST00000395416 346 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 OR7E156P-201ENST00000400303 464 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC092638.1-201ENST00000411966 1275 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 PSMD10P2-201ENST00000432890 672 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 CR769776.1-201ENST00000441254 787 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 OR2L9P-201ENST00000444456 913 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 Z77249.1-201ENST00000444622 1175 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 RPL23AP28-201ENST00000448062 470 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 OR2AF1P-201ENST00000454899 889 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-599P-201ENST00000459383 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-1193P-201ENST00000459461 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC134050.1-201ENST00000495088 933 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RN7SL187P-201ENST00000495587 303 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC106822.1-201ENST00000502647 526 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 SNX18P23-201ENST00000510867 677 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 OR5AK3P-201ENST00000527486 1297 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 OR8I1P-201ENST00000529291 931 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 TDGP1-201ENST00000543961 1229 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX6-1P78426 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 AL590032.1-201ENST00000604920 252 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC024060.1-201ENST00000607052 494 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AL355493.4-201ENST00000618530 292 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-368P-201ENST00000620928 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 RNU6-538P-201ENST00000622329 107 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 MTND2P41-201ENST00000637599 773 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 AC020658.2-201ENST00000559030 4020 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NKX6-1P78426 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX6-1P78426 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 AC003973.3-201ENST00000624863 2822 ntBASIC5.87□□□□□ -1.47
NKX6-1P78426 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX6-1P78426 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX6-1P78426 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC073365.1-203ENST00000641055 1992 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 ZNF806-201ENST00000438300 1774 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 BX284613.1-201ENST00000452221 1641 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC130360.2-201ENST00000533477 1556 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 VN2R3P-201ENST00000422626 1412 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NKX6-1P78426 RNU6-532P-201ENST00000384318 107 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms