Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH12P55289 AC068339.2-201ENST00000534395 618 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AC023158.1-201ENST00000561632 1025 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AC093510.2-201ENST00000562820 896 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AC007346.2-201ENST00000564816 892 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AL158211.1-201ENST00000566763 763 ntBASIC5.53□□□□□ -1.52
CDH12P55289 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH12P55289 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 NDUFB9P1-201ENST00000604683 510 ntBASIC5.53□□□□□ -1.52
CDH12P55289 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 AC097504.2-201ENST00000608088 454 ntBASIC5.53□□□□□ -1.52
CDH12P55289 CR589904.2-201ENST00000612533 440 ntBASIC5.53□□□□□ -1.52
CDH12P55289 CXADRP3-202ENST00000617265 1100 ntBASIC5.53□□□□□ -1.52
CDH12P55289 MIR6823-201ENST00000622118 61 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AL138955.1-201ENST00000622881 1040 ntBASIC5.53□□□□□ -1.52
CDH12P55289 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 AC130304.1-201ENST00000622942 2385 ntBASIC5.53□□□□□ -1.52
CDH12P55289 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 AL049634.1-201ENST00000453770 1720 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 AC119674.1-202ENST00000641333 1860 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
CDH12P55289 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 AC009501.3-201ENST00000605001 1352 ntBASIC5.53□□□□□ -1.52
CDH12P55289 CDY11P-201ENST00000447168 1651 ntBASIC5.53□□□□□ -1.52
CDH12P55289 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH12P55289 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 SNORA72.3-201ENST00000365074 132 ntBASIC5.52□□□□□ -1.53
CDH12P55289 RNU6-609P-201ENST00000365459 107 ntBASIC5.52□□□□□ -1.53
CDH12P55289 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH12P55289 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH12P55289 SEPT7P8-201ENST00000413308 775 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AL096829.1-201ENST00000413677 457 ntBASIC5.52□□□□□ -1.53
CDH12P55289 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH12P55289 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 ZNF965P-201ENST00000432501 817 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AL645638.1-201ENST00000440519 361 ntBASIC5.52□□□□□ -1.53
CDH12P55289 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 SDC4P-201ENST00000453285 601 ntBASIC5.52□□□□□ -1.53
CDH12P55289 CABYRP1-201ENST00000465493 1045 ntBASIC5.52□□□□□ -1.53
CDH12P55289 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 RPL12P30-201ENST00000488389 499 ntBASIC5.52□□□□□ -1.53
CDH12P55289 SNRPCP11-201ENST00000492453 205 ntBASIC5.52□□□□□ -1.53
CDH12P55289 NACAP5-201ENST00000509863 636 ntBASIC5.52□□□□□ -1.53
CDH12P55289 TPT1P8-201ENST00000510120 555 ntBASIC5.52□□□□□ -1.53
CDH12P55289 FABP5P6-201ENST00000510588 409 ntBASIC5.52□□□□□ -1.53
CDH12P55289 ZNF519P4-201ENST00000514008 125 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AC110760.3-202ENST00000515177 371 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 Vault.2-201ENST00000516519 98 ntBASIC5.52□□□□□ -1.53
CDH12P55289 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 AC090424.1-201ENST00000535243 736 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH12P55289 DPPA3P2-202ENST00000557188 1219 ntBASIC5.52□□□□□ -1.53
CDH12P55289 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 AP005136.2-201ENST00000583253 1049 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AC006116.7-201ENST00000590141 756 ntBASIC5.52□□□□□ -1.53
CDH12P55289 WBP1LP12-201ENST00000604449 331 ntBASIC5.52□□□□□ -1.53
CDH12P55289 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 AC012676.3-201ENST00000614983 479 ntBASIC5.52□□□□□ -1.53
CDH12P55289 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 AL355974.3-201ENST00000617383 467 ntBASIC5.52□□□□□ -1.53
CDH12P55289 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH12P55289 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms