Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 RBBP4P1-201ENST00000502424 1276 ntBASIC5.4□□□□□ -1.54
CDH11P55287 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 AC097486.1-201ENST00000515331 210 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC130365.2-201ENST00000525882 1201 ntBASIC5.4□□□□□ -1.54
CDH11P55287 OR8Q1P-201ENST00000526467 655 ntBASIC5.4□□□□□ -1.54
CDH11P55287 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 AC090826.1-203ENST00000569235 490 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH11P55287 MIR4433B-201ENST00000581329 102 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 MIR4701-201ENST00000583094 63 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH11P55287 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 AC119403.2-201ENST00000590960 598 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC006115.2-201ENST00000596823 202 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH11P55287 uc_338.26-201ENST00000612659 160 ntBASIC5.4□□□□□ -1.54
CDH11P55287 AL355974.3-201ENST00000617383 467 ntBASIC5.4□□□□□ -1.54
CDH11P55287 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH11P55287 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH11P55287 AC079776.5-201ENST00000641920 211 ntBASIC5.4□□□□□ -1.54
CDH11P55287 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH11P55287 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
CDH11P55287 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CDH11P55287 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH11P55287 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 AC114774.1-201ENST00000507410 1770 ntBASIC5.39□□□□□ -1.55
CDH11P55287 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 RNA5SP453-201ENST00000362503 119 ntBASIC5.39□□□□□ -1.55
CDH11P55287 RNU105B-201ENST00000364478 208 ntBASIC5.39□□□□□ -1.55
CDH11P55287 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 GABARAPL3-201ENST00000412799 354 ntBASIC5.39□□□□□ -1.55
CDH11P55287 MTND4LP21-201ENST00000415303 295 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 AC114878.1-201ENST00000441166 358 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AC073072.2-201ENST00000447425 348 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH11P55287 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH11P55287 RPL34P33-201ENST00000486062 334 ntBASIC5.39□□□□□ -1.55
CDH11P55287 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH11P55287 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH11P55287 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 NPM1P5-201ENST00000557228 838 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AC092332.1-201ENST00000563684 829 ntBASIC5.39□□□□□ -1.55
CDH11P55287 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 AL365181.4-201ENST00000609800 547 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AL133445.2-201ENST00000611191 527 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AC009032.1-201ENST00000617574 431 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AL512652.1-201ENST00000619006 500 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AL355480.1-201ENST00000629041 99 ntBASIC5.39□□□□□ -1.55
CDH11P55287 HPVC1-201ENST00000629899 1198 ntBASIC5.39□□□□□ -1.55
CDH11P55287 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 AC125336.1-201ENST00000508893 2827 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH11P55287 AC027279.4-201ENST00000624371 2072 ntBASIC5.39□□□□□ -1.55
CDH11P55287 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.39□□□□□ -1.55
CDH11P55287 EIF3EP1-201ENST00000433978 1316 ntBASIC5.39□□□□□ -1.55
CDH11P55287 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 AC093671.1-201ENST00000624981 2929 ntBASIC5.39□□□□□ -1.55
CDH11P55287 SAMM50P1-201ENST00000455403 1399 ntBASIC5.39□□□□□ -1.55
CDH11P55287 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH11P55287 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH11P55287 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH11P55287 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 UGT2B24P-201ENST00000514441 1597 ntBASIC5.38□□□□□ -1.55
CDH11P55287 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms