Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.31□□□□□ -1.4
VCPP55072 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.31□□□□□ -1.4
VCPP55072 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.31□□□□□ -1.4
VCPP55072 TRAV35-201ENST00000390462 330 ntBASIC6.31□□□□□ -1.4
VCPP55072 AL096829.1-201ENST00000413677 457 ntBASIC6.31□□□□□ -1.4
VCPP55072 GAPDHP75-201ENST00000433910 943 ntBASIC6.31□□□□□ -1.4
VCPP55072 AL162739.1-201ENST00000450606 307 ntBASIC6.31□□□□□ -1.4
VCPP55072 RN7SL329P-201ENST00000467740 299 ntBASIC6.31□□□□□ -1.4
VCPP55072 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.31□□□□□ -1.4
VCPP55072 AC105420.1-201ENST00000504389 582 ntBASIC6.31□□□□□ -1.4
VCPP55072 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VCPP55072 AC093815.1-201ENST00000508637 280 ntBASIC6.31□□□□□ -1.4
VCPP55072 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.31□□□□□ -1.4
VCPP55072 MIR4505-201ENST00000582238 73 ntBASIC6.31□□□□□ -1.4
VCPP55072 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.31□□□□□ -1.4
VCPP55072 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.31□□□□□ -1.4
VCPP55072 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.31□□□□□ -1.4
VCPP55072 AC092070.2-203ENST00000598377 3644 ntBASIC6.31□□□□□ -1.4
VCPP55072 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.3□□□□□ -1.4
VCPP55072 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 SNORA56-201ENST00000383966 129 ntBASIC6.3□□□□□ -1.4
VCPP55072 RN7SKP59-201ENST00000410520 314 ntBASIC6.3□□□□□ -1.4
VCPP55072 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.3□□□□□ -1.4
VCPP55072 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.3□□□□□ -1.4
VCPP55072 RPL12P3-201ENST00000440080 396 ntBASIC6.3□□□□□ -1.4
VCPP55072 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 AC108161.1-201ENST00000461060 402 ntBASIC6.3□□□□□ -1.4
VCPP55072 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 KATNBL1P4-201ENST00000503545 918 ntBASIC6.3□□□□□ -1.4
VCPP55072 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.3□□□□□ -1.4
VCPP55072 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.3□□□□□ -1.4
VCPP55072 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.3□□□□□ -1.4
VCPP55072 SNORA70.20-201ENST00000516848 126 ntBASIC6.3□□□□□ -1.4
VCPP55072 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.3□□□□□ -1.4
VCPP55072 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 AL645933.2-201ENST00000606743 1207 ntBASIC6.3□□□□□ -1.4
VCPP55072 AL445670.1-201ENST00000618889 801 ntBASIC6.3□□□□□ -1.4
VCPP55072 MIR6810-201ENST00000622701 70 ntBASIC6.3□□□□□ -1.4
VCPP55072 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VCPP55072 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.3□□□□□ -1.4
VCPP55072 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.3□□□□□ -1.4
VCPP55072 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VCPP55072 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
VCPP55072 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.29□□□□□ -1.4
VCPP55072 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
VCPP55072 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VCPP55072 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.29□□□□□ -1.4
VCPP55072 SNORA64.1-201ENST00000362600 132 ntBASIC6.29□□□□□ -1.4
VCPP55072 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 USP24P1-201ENST00000433802 779 ntBASIC6.29□□□□□ -1.4
VCPP55072 RPS3AP38-201ENST00000435889 763 ntBASIC6.29□□□□□ -1.4
VCPP55072 SPRYD7P1-201ENST00000443861 570 ntBASIC6.29□□□□□ -1.4
VCPP55072 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.29□□□□□ -1.4
VCPP55072 CBX1P2-201ENST00000453841 458 ntBASIC6.29□□□□□ -1.4
VCPP55072 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.29□□□□□ -1.4
VCPP55072 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.29□□□□□ -1.4
VCPP55072 RN7SL184P-201ENST00000488308 297 ntBASIC6.29□□□□□ -1.4
VCPP55072 BX510359.5-201ENST00000515651 304 ntBASIC6.29□□□□□ -1.4
VCPP55072 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 MIR4776-2-201ENST00000580204 80 ntBASIC6.29□□□□□ -1.4
VCPP55072 AP001496.3-201ENST00000580230 913 ntBASIC6.29□□□□□ -1.4
VCPP55072 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.29□□□□□ -1.4
VCPP55072 AP001267.4-201ENST00000602598 545 ntBASIC6.29□□□□□ -1.4
VCPP55072 IMMP1LP3-201ENST00000604197 224 ntBASIC6.29□□□□□ -1.4
VCPP55072 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms