Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MRRFP1-201ENST00000435941 1675 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 CASC19-228ENST00000641414 1684 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AC010624.4-201ENST00000597606 1351 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMK1P53667 HMGB1P32-201ENST00000425971 565 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMK1P53667 FMO7P-201ENST00000436045 768 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.99□□□□□ -1.45
LIMK1P53667 OTX2P1-201ENST00000450956 354 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 LRRC37A14P-201ENST00000452297 462 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AL645937.3-201ENST00000453647 936 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMK1P53667 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMK1P53667 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 RNU6-551P-201ENST00000516661 103 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 Y_RNA.710-201ENST00000516975 110 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 IGLV3-6-201ENST00000523937 250 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AC110056.1-201ENST00000525759 911 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 OR10G5P-201ENST00000532733 358 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMK1P53667 DUX4L52-201ENST00000549363 777 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 AC024940.4-201ENST00000605507 246 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 Z95327.3-201ENST00000610385 572 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 MRPL57P1-201ENST00000621486 265 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 AC079753.1-201ENST00000623243 3868 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LIMK1P53667 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LIMK1P53667 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 RNU6-171P-201ENST00000384354 107 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 RNU6-729P-201ENST00000384399 107 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AL360271.1-201ENST00000395679 510 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 GAPDHP15-201ENST00000398586 975 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC002524.1-201ENST00000411687 547 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 ELOCP3-201ENST00000439303 348 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC073072.2-201ENST00000447425 348 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC007386.1-201ENST00000455212 582 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 MTCYBP14-201ENST00000457471 715 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC011225.1-201ENST00000457751 369 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 SLC25A51P1-201ENST00000468432 871 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC114728.1-201ENST00000488289 483 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 OR52A4P-203ENST00000498233 1014 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 CCNHP1-201ENST00000513311 678 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.98□□□□□ -1.45
LIMK1P53667 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 AL049874.4-201ENST00000557593 255 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.98□□□□□ -1.45
LIMK1P53667 MIR4420-201ENST00000583944 77 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMK1P53667 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 AC009303.3-201ENST00000591103 736 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 AL158062.1-201ENST00000619632 745 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 SMG1P7-201ENST00000565246 2704 ntBASIC5.98□□□□□ -1.45
LIMK1P53667 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMK1P53667 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMK1P53667 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LIMK1P53667 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.97□□□□□ -1.45
LIMK1P53667 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.97□□□□□ -1.45
LIMK1P53667 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.97□□□□□ -1.45
LIMK1P53667 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 AC092724.1-201ENST00000624623 3397 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms