Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC025458.1-201ENST00000506046 166 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC106800.3-201ENST00000511389 308 ntBASIC6.34□□□□□ -1.39
COPAP53621 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 RN7SKP157-201ENST00000516174 282 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 VTA1P2-201ENST00000520205 911 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.34□□□□□ -1.39
COPAP53621 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.34□□□□□ -1.39
COPAP53621 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.34□□□□□ -1.39
COPAP53621 AC015911.5-201ENST00000587076 451 ntBASIC6.34□□□□□ -1.39
COPAP53621 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.34□□□□□ -1.39
COPAP53621 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AL008723.3-201ENST00000608926 449 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC092681.3-201ENST00000609463 678 ntBASIC6.34□□□□□ -1.39
COPAP53621 CR589904.2-201ENST00000612533 440 ntBASIC6.34□□□□□ -1.39
COPAP53621 MIR6862-1-201ENST00000613016 70 ntBASIC6.34□□□□□ -1.39
COPAP53621 MIR6862-2-201ENST00000614755 70 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 SNX18P12-201ENST00000624821 759 ntBASIC6.34□□□□□ -1.39
COPAP53621 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 SHQ1P1-201ENST00000437111 1544 ntBASIC6.34□□□□□ -1.39
COPAP53621 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COPAP53621 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COPAP53621 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.34□□□□□ -1.4
COPAP53621 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COPAP53621 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COPAP53621 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COPAP53621 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
COPAP53621 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.33□□□□□ -1.4
COPAP53621 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 MTND4P9-201ENST00000507819 1346 ntBASIC6.33□□□□□ -1.4
COPAP53621 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.33□□□□□ -1.4
COPAP53621 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 IPPKP1-201ENST00000422501 768 ntBASIC6.33□□□□□ -1.4
COPAP53621 OR5W1P-201ENST00000423705 938 ntBASIC6.33□□□□□ -1.4
COPAP53621 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AL353662.1-201ENST00000439099 327 ntBASIC6.33□□□□□ -1.4
COPAP53621 AL513321.1-201ENST00000441175 761 ntBASIC6.33□□□□□ -1.4
COPAP53621 XKRY2-201ENST00000442362 1093 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.33□□□□□ -1.4
COPAP53621 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 AC108729.2-201ENST00000476543 840 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC092902.1-201ENST00000486999 259 ntBASIC6.33□□□□□ -1.4
COPAP53621 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 PRMT5P1-201ENST00000514351 598 ntBASIC6.33□□□□□ -1.4
COPAP53621 RNA5SP340-201ENST00000517132 107 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC067904.2-201ENST00000517322 1283 ntBASIC6.33□□□□□ -1.4
COPAP53621 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.33□□□□□ -1.4
COPAP53621 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AP003102.1-201ENST00000525638 661 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC113192.3-201ENST00000529152 742 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC027026.1-201ENST00000532323 742 ntBASIC6.33□□□□□ -1.4
COPAP53621 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.33□□□□□ -1.4
COPAP53621 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 AC090330.1-201ENST00000588646 764 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 AC068768.2-201ENST00000602352 343 ntBASIC6.33□□□□□ -1.4
COPAP53621 AC073333.2-201ENST00000603589 769 ntBASIC6.33□□□□□ -1.4
COPAP53621 BNIP3P31-201ENST00000604515 566 ntBASIC6.33□□□□□ -1.4
COPAP53621 AL591167.1-201ENST00000607321 456 ntBASIC6.33□□□□□ -1.4
COPAP53621 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.33□□□□□ -1.4
COPAP53621 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.33□□□□□ -1.4
COPAP53621 AL512652.1-201ENST00000619006 500 ntBASIC6.33□□□□□ -1.4
COPAP53621 AL359976.1-201ENST00000418655 3528 ntBASIC6.33□□□□□ -1.4
COPAP53621 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPAP53621 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms