Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 ENPP7P3-201ENST00000509123 241 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 IGKV1D-32-201ENST00000517449 318 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AL133399.1-201ENST00000527476 298 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC027369.5-201ENST00000533838 755 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC092865.1-201ENST00000544395 1023 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC009729.1-201ENST00000548873 1133 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 RNU4ATAC-201ENST00000580972 127 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.48□□□□□ -1.53
GTF2A1P52655 RPS4XP21-201ENST00000603814 750 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 MIR6731-201ENST00000614863 72 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC009283.1-201ENST00000615852 645 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AL121890.2-201ENST00000617644 465 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC006840.1-201ENST00000623069 542 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 SALL4P2-201ENST00000423288 2910 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.48□□□□□ -1.53
GTF2A1P52655 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GTF2A1P52655 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
GTF2A1P52655 AC006206.1-201ENST00000544842 3387 ntBASIC5.48□□□□□ -1.53
GTF2A1P52655 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.48□□□□□ -1.53
GTF2A1P52655 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
GTF2A1P52655 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GTF2A1P52655 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 AL162456.1-201ENST00000634535 2006 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 RNA5SP28-201ENST00000363841 119 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 ARSFP1-201ENST00000398758 477 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 E2F6P1-201ENST00000428850 745 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 OR52U1P-201ENST00000439752 923 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC093166.4-201ENST00000457867 318 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.47□□□□□ -1.53
GTF2A1P52655 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.47□□□□□ -1.53
GTF2A1P52655 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GTF2A1P52655 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 MIR6732-201ENST00000619365 60 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 MIR6807-201ENST00000621968 92 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.47□□□□□ -1.53
GTF2A1P52655 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GTF2A1P52655 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.47□□□□□ -1.53
GTF2A1P52655 AL450345.1-202ENST00000605741 3881 ntBASIC5.47□□□□□ -1.53
GTF2A1P52655 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
GTF2A1P52655 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
GTF2A1P52655 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
GTF2A1P52655 AC079097.1-201ENST00000512187 1399 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
GTF2A1P52655 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
GTF2A1P52655 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
GTF2A1P52655 RNA5SP429-201ENST00000363688 109 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
GTF2A1P52655 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GTF2A1P52655 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GTF2A1P52655 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
GTF2A1P52655 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GTF2A1P52655 ATP5F1P2-201ENST00000398143 760 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.46□□□□□ -1.54
GTF2A1P52655 GTF2IP14-201ENST00000441415 586 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 AC239800.1-201ENST00000442049 719 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 AKR1D1P1-201ENST00000457236 936 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 OR9N1P-201ENST00000491296 333 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.46□□□□□ -1.54
GTF2A1P52655 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
GTF2A1P52655 AC073358.1-201ENST00000505671 684 ntBASIC5.46□□□□□ -1.54
GTF2A1P52655 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.46□□□□□ -1.54
GTF2A1P52655 AC093870.1-201ENST00000506837 213 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms