Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS7P4-201ENST00000444127 582 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AL845321.1-201ENST00000444603 348 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 TPT1P1-201ENST00000458495 518 ntBASIC5.41□□□□□ -1.54
SOX2P48431 RPL21P18-201ENST00000469899 480 ntBASIC5.41□□□□□ -1.54
SOX2P48431 EIF1P7-201ENST00000487533 337 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AC093534.1-201ENST00000504977 132 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 SETP21-201ENST00000514799 892 ntBASIC5.41□□□□□ -1.54
SOX2P48431 RN7SKP287-201ENST00000516546 266 ntBASIC5.41□□□□□ -1.54
SOX2P48431 SCARNA11.1-201ENST00000516918 132 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 AL133399.1-201ENST00000527476 298 ntBASIC5.41□□□□□ -1.54
SOX2P48431 LRRC34P1-201ENST00000542742 915 ntBASIC5.41□□□□□ -1.54
SOX2P48431 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.41□□□□□ -1.54
SOX2P48431 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 AL022067.1-201ENST00000602426 454 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AC093424.1-201ENST00000604999 338 ntBASIC5.41□□□□□ -1.54
SOX2P48431 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.41□□□□□ -1.54
SOX2P48431 AC083865.1-201ENST00000636634 831 ntBASIC5.41□□□□□ -1.54
SOX2P48431 OR7A1P-202ENST00000641542 1158 ntBASIC5.41□□□□□ -1.54
SOX2P48431 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.41□□□□□ -1.54
SOX2P48431 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 MTND5P11-201ENST00000511037 1812 ntBASIC5.41□□□□□ -1.54
SOX2P48431 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 AC004023.1-201ENST00000561473 1744 ntBASIC5.4□□□□□ -1.54
SOX2P48431 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 ZNF29P-201ENST00000225587 168 ntBASIC5.4□□□□□ -1.54
SOX2P48431 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SOX2P48431 RNU6-252P-201ENST00000363232 107 ntBASIC5.4□□□□□ -1.54
SOX2P48431 SNORA43.1-201ENST00000364863 140 ntBASIC5.4□□□□□ -1.54
SOX2P48431 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX2P48431 RNU6-481P-201ENST00000384194 107 ntBASIC5.4□□□□□ -1.54
SOX2P48431 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 RN7SKP205-201ENST00000410999 307 ntBASIC5.4□□□□□ -1.54
SOX2P48431 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
SOX2P48431 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 AC021876.1-201ENST00000425959 359 ntBASIC5.4□□□□□ -1.54
SOX2P48431 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AL035246.1-201ENST00000433554 1255 ntBASIC5.4□□□□□ -1.54
SOX2P48431 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 RPS10P14-201ENST00000440748 502 ntBASIC5.4□□□□□ -1.54
SOX2P48431 MTCYBP11-201ENST00000447254 1109 ntBASIC5.4□□□□□ -1.54
SOX2P48431 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 AC005412.2-201ENST00000492004 341 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC018645.1-201ENST00000505003 109 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.4□□□□□ -1.54
SOX2P48431 CYP4F27P-201ENST00000514557 494 ntBASIC5.4□□□□□ -1.54
SOX2P48431 MORF4L1P3-201ENST00000525966 950 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AP002004.1-206ENST00000532441 876 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC139103.1-201ENST00000534696 1030 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX2P48431 RPL3P13-201ENST00000550415 216 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC089984.3-201ENST00000552838 363 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.4□□□□□ -1.54
SOX2P48431 AL132857.1-201ENST00000555180 708 ntBASIC5.4□□□□□ -1.54
SOX2P48431 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX2P48431 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 MRPL45P2-203ENST00000573318 473 ntBASIC5.4□□□□□ -1.54
SOX2P48431 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 RNU4ATAC-201ENST00000580972 127 ntBASIC5.4□□□□□ -1.54
SOX2P48431 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX2P48431 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX2P48431 AC136428.4-201ENST00000634254 1155 ntBASIC5.4□□□□□ -1.54
SOX2P48431 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX2P48431 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.4□□□□□ -1.55
SOX2P48431 AL136984.1-201ENST00000607611 1893 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms