Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL355433.1-201ENST00000422804 300 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 VDAC2P4-201ENST00000452925 711 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC100832.1-201ENST00000471945 383 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCC3P46736 RN7SKP248-201ENST00000516278 305 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 IGLV3-24-201ENST00000517477 197 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCC3P46736 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 OR4A6P-201ENST00000534364 970 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC015720.2-201ENST00000567709 334 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.05□□□□□ -1.44
BRCC3P46736 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 MAPK10-350ENST00000641777 965 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC011933.2-201ENST00000578539 2790 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 PWAR1-201ENST00000624188 2414 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 AC005225.5-201ENST00000623547 2225 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BRCC3P46736 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCC3P46736 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BRCC3P46736 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BRCC3P46736 RN7SKP28-201ENST00000364770 305 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 RNA5SP91-201ENST00000390902 119 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 GAPDHP42-201ENST00000406848 981 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 SNORA11B-201ENST00000408175 129 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 RNA5SP251-201ENST00000410614 137 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 RNU6-233P-201ENST00000410845 141 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.04□□□□□ -1.44
BRCC3P46736 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 AC114982.2-201ENST00000461396 358 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.04□□□□□ -1.44
BRCC3P46736 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.04□□□□□ -1.44
BRCC3P46736 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.04□□□□□ -1.44
BRCC3P46736 AL121594.2-201ENST00000541658 472 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 AC093524.1-201ENST00000564266 1094 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.04□□□□□ -1.44
BRCC3P46736 PPATP2-201ENST00000605635 508 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC010245.2-201ENST00000606908 1167 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC005840.5-201ENST00000619166 599 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 MIR8080-201ENST00000622224 89 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC132068.1-201ENST00000623805 459 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 AC063952.1-203ENST00000634410 658 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BRCC3P46736 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 AC018809.2-201ENST00000602436 3823 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCC3P46736 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
BRCC3P46736 AC068769.1-201ENST00000474767 2426 ntBASIC6.04□□□□□ -1.44
BRCC3P46736 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms