Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
CLIP1P30622 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.85□□□□□ -0.99
CLIP1P30622 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CLIP1P30622 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 RN7SKP273-201ENST00000411392 314 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 RPS27P18-201ENST00000431701 247 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.85□□□□□ -0.99
CLIP1P30622 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.85□□□□□ -0.99
CLIP1P30622 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 RBM22P1-201ENST00000578589 1214 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.85□□□□□ -0.99
CLIP1P30622 AL136295.6-201ENST00000610486 658 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 AC079414.3-201ENST00000612986 1090 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 RPSAP73-201ENST00000614820 330 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.85□□□□□ -0.99
CLIP1P30622 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.85□□□□□ -0.99
CLIP1P30622 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 AC092070.2-203ENST00000598377 3644 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 AL158152.1-201ENST00000602652 1435 ntBASIC8.85□□□□□ -0.99
CLIP1P30622 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CLIP1P30622 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.84□□□□□ -0.99
CLIP1P30622 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.84□□□□□ -0.99
CLIP1P30622 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CLIP1P30622 RNU1-77P-201ENST00000390868 162 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 RPL11P3-201ENST00000395256 523 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 AL645927.1-201ENST00000396783 406 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.84□□□□□ -0.99
CLIP1P30622 FAR2P1-206ENST00000449736 709 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 ATP5LP5-201ENST00000483050 299 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.84□□□□□ -0.99
CLIP1P30622 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
CLIP1P30622 AC078878.1-201ENST00000539832 958 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.84□□□□□ -0.99
CLIP1P30622 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.84□□□□□ -0.99
CLIP1P30622 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CLIP1P30622 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CLIP1P30622 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.84□□□□□ -0.99
CLIP1P30622 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.84□□□□□ -0.99
CLIP1P30622 AC010329.1-201ENST00000593903 8328 ntBASIC8.84□□□□□ -0.99
CLIP1P30622 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CLIP1P30622 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 AC068870.1-201ENST00000563737 2455 ntBASIC8.83□□□□□ -1
CLIP1P30622 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.83□□□□□ -1
CLIP1P30622 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
CLIP1P30622 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.83□□□□□ -1
CLIP1P30622 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.83□□□□□ -1
CLIP1P30622 CYCSP6-201ENST00000434498 302 ntBASIC8.83□□□□□ -1
CLIP1P30622 EEF1B2P5-201ENST00000444820 548 ntBASIC8.83□□□□□ -1
CLIP1P30622 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.83□□□□□ -1
CLIP1P30622 RPL7P39-201ENST00000481157 744 ntBASIC8.83□□□□□ -1
CLIP1P30622 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 OR4A46P-201ENST00000527255 933 ntBASIC8.83□□□□□ -1
CLIP1P30622 BLZF2P-201ENST00000553776 1130 ntBASIC8.83□□□□□ -1
CLIP1P30622 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.83□□□□□ -1
CLIP1P30622 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.83□□□□□ -1
CLIP1P30622 AP004289.1-201ENST00000436307 2205 ntBASIC8.83□□□□□ -1
CLIP1P30622 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CLIP1P30622 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CLIP1P30622 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.82□□□□□ -1
CLIP1P30622 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.82□□□□□ -1
CLIP1P30622 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CLIP1P30622 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
CLIP1P30622 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.82□□□□□ -1
CLIP1P30622 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.82□□□□□ -1
CLIP1P30622 AL390774.1-201ENST00000411924 246 ntBASIC8.82□□□□□ -1
CLIP1P30622 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.82□□□□□ -1
CLIP1P30622 RNF10P1-201ENST00000418589 369 ntBASIC8.82□□□□□ -1
CLIP1P30622 HMGN2P6-201ENST00000551091 273 ntBASIC8.82□□□□□ -1
CLIP1P30622 AL049779.2-201ENST00000553847 315 ntBASIC8.82□□□□□ -1
CLIP1P30622 AC073429.2-201ENST00000569694 1444 ntBASIC8.82□□□□□ -1
CLIP1P30622 AC018809.2-201ENST00000602436 3823 ntBASIC8.82□□□□□ -1
CLIP1P30622 AC024940.4-201ENST00000605507 246 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms