Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A5P29400 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL4A5P29400 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A5P29400 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.55□□□□□ -1.36
COL4A5P29400 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 AL078621.3-201ENST00000623707 2042 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 COX6B1P1-201ENST00000415962 213 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AC245028.1-201ENST00000423259 256 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 TPT1P13-201ENST00000449760 499 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AL451063.1-201ENST00000450164 1133 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 Z92846.1-201ENST00000456203 268 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 PRELID3BP5-201ENST00000508612 460 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 MAPK10-350ENST00000641777 965 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 AL359922.2-201ENST00000581788 3017 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
COL4A5P29400 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 MIPEPP2-201ENST00000422560 1819 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 AL009179.1-201ENST00000406085 265 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC096921.1-201ENST00000411661 375 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 USP9YP9-201ENST00000429406 715 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 FABP5P2-201ENST00000439042 408 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 RPL12P39-201ENST00000455456 496 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.54□□□□□ -1.36
COL4A5P29400 SCARNA16.4-201ENST00000516956 187 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 PCNPP1-201ENST00000552501 511 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AP001885.1-201ENST00000621658 558 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC091905.4-201ENST00000623432 202 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 AC073869.10-201ENST00000642016 354 ntBASIC6.54□□□□□ -1.36
COL4A5P29400 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A5P29400 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A5P29400 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A5P29400 RNU1-32P-201ENST00000363937 159 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A5P29400 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A5P29400 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.53□□□□□ -1.36
COL4A5P29400 AC016712.1-201ENST00000431088 378 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 CT45A11P-201ENST00000448043 1134 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 RPL7P16-201ENST00000479738 738 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 AC060766.1-201ENST00000590824 627 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A5P29400 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 AC132825.1-201ENST00000463573 2247 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 AC011933.2-201ENST00000578539 2790 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 EPS15P1-202ENST00000459691 2071 ntBASIC6.53□□□□□ -1.36
COL4A5P29400 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A5P29400 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A5P29400 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A5P29400 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL4A5P29400 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
COL4A5P29400 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 AP003170.5-201ENST00000397185 335 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 CHMP1B2P-201ENST00000399581 597 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms