Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 MFSD8-219ENST00000641228 2559 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 MIR23B-201ENST00000384832 97 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPRMP28827 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPRMP28827 TPM3P3-201ENST00000521343 354 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 AC021006.3-201ENST00000530771 192 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 MIR3160-1-201ENST00000577972 85 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.16□□□□□ -1.1
PTPRMP28827 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PTPRMP28827 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPRMP28827 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPRMP28827 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPRMP28827 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPRMP28827 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPRMP28827 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPRMP28827 CASC19-260ENST00000641828 2001 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 USP9YP3-201ENST00000434481 1766 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPRMP28827 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPRMP28827 SNORA16A-201ENST00000384342 137 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPRMP28827 AC122718.1-201ENST00000439448 744 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.15□□□□□ -1.1
PTPRMP28827 FAM133DP-201ENST00000464802 691 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 EIF3KP3-201ENST00000514461 639 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 CYP4F27P-201ENST00000514557 494 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 RN7SKP122-201ENST00000515923 296 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PTPRMP28827 AC008147.3-201ENST00000548666 354 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 MIR132-201ENST00000591554 101 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 RPL26P30-202ENST00000602923 645 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 AC010857.1-201ENST00000606398 594 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 MIR92B-201ENST00000607575 96 ntBASIC8.15□□□□□ -1.1
PTPRMP28827 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPRMP28827 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPRMP28827 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPRMP28827 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PTPRMP28827 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PTPRMP28827 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.15□□□□□ -1.11
PTPRMP28827 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PTPRMP28827 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTPRMP28827 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PTPRMP28827 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 IRF5P1-201ENST00000504852 2164 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 AL133388.1-201ENST00000404509 287 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 RNU2-50P-201ENST00000410494 143 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRMP28827 AL353626.3-201ENST00000413399 657 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.14□□□□□ -1.11
PTPRMP28827 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 AC092647.2-201ENST00000452998 253 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 RPL10P17-201ENST00000453852 316 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PTPRMP28827 AC078899.1-201ENST00000521432 1185 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
PTPRMP28827 AP001521.2-201ENST00000608772 546 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 AC006338.2-201ENST00000616864 791 ntBASIC8.14□□□□□ -1.11
PTPRMP28827 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRMP28827 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPRMP28827 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTPRMP28827 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PTPRMP28827 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRMP28827 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTPRMP28827 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 AC130304.1-201ENST00000622942 2385 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 TMA16P2-201ENST00000413187 601 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 FABP5P2-201ENST00000439042 408 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRMP28827 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRMP28827 RPL21P129-201ENST00000491732 478 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRMP28827 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPRMP28827 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPRMP28827 AC008033.2-201ENST00000542626 177 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 UBE2FP2-201ENST00000566646 462 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 AC011487.3-201ENST00000593607 453 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms