Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 snoU13.29-201ENST00000459370 104 ntBASIC4.99□□□□□ -1.61
USF1P22415 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 AC099521.1-201ENST00000482557 334 ntBASIC4.99□□□□□ -1.61
USF1P22415 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.99□□□□□ -1.61
USF1P22415 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.99□□□□□ -1.61
USF1P22415 RNA5SP362-201ENST00000516048 118 ntBASIC4.99□□□□□ -1.61
USF1P22415 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.99□□□□□ -1.61
USF1P22415 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.99□□□□□ -1.61
USF1P22415 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 AL589674.2-201ENST00000604304 337 ntBASIC4.99□□□□□ -1.61
USF1P22415 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 AC140134.1-201ENST00000511830 3544 ntBASIC4.99□□□□□ -1.61
USF1P22415 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 AC092724.1-201ENST00000624623 3397 ntBASIC4.99□□□□□ -1.61
USF1P22415 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USF1P22415 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
USF1P22415 AC005725.1-201ENST00000577346 2607 ntBASIC4.98□□□□□ -1.61
USF1P22415 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
USF1P22415 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.98□□□□□ -1.61
USF1P22415 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 ICE2P1-201ENST00000512800 1849 ntBASIC4.98□□□□□ -1.61
USF1P22415 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USF1P22415 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USF1P22415 AL391361.1-201ENST00000405580 489 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC015977.1-201ENST00000418887 292 ntBASIC4.98□□□□□ -1.61
USF1P22415 NMD3P2-201ENST00000421815 761 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.98□□□□□ -1.61
USF1P22415 KIF4CP-201ENST00000422742 1279 ntBASIC4.98□□□□□ -1.61
USF1P22415 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.98□□□□□ -1.61
USF1P22415 AC002504.1-201ENST00000438281 691 ntBASIC4.98□□□□□ -1.61
USF1P22415 SUMO2P3-201ENST00000438311 288 ntBASIC4.98□□□□□ -1.61
USF1P22415 AL512593.1-201ENST00000444758 779 ntBASIC4.98□□□□□ -1.61
USF1P22415 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USF1P22415 RPL23AP60-201ENST00000450011 454 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.98□□□□□ -1.61
USF1P22415 AC114982.2-201ENST00000461396 358 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC073594.1-201ENST00000462065 364 ntBASIC4.98□□□□□ -1.61
USF1P22415 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 AL035690.1-201ENST00000490892 383 ntBASIC4.98□□□□□ -1.61
USF1P22415 EIF3LP3-201ENST00000495197 822 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC008629.2-201ENST00000503783 483 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC008638.1-201ENST00000506035 866 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.98□□□□□ -1.61
USF1P22415 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.98□□□□□ -1.61
USF1P22415 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.98□□□□□ -1.61
USF1P22415 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.98□□□□□ -1.61
USF1P22415 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 MIR4505-201ENST00000582238 73 ntBASIC4.98□□□□□ -1.61
USF1P22415 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
USF1P22415 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.98□□□□□ -1.61
USF1P22415 TET1P1-201ENST00000426627 2301 ntBASIC4.98□□□□□ -1.61
USF1P22415 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USF1P22415 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
USF1P22415 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USF1P22415 CDY11P-201ENST00000447168 1651 ntBASIC4.98□□□□□ -1.61
USF1P22415 NLRP3P1-201ENST00000622303 1785 ntBASIC4.98□□□□□ -1.61
USF1P22415 AC016745.2-201ENST00000608834 3443 ntBASIC4.98□□□□□ -1.61
USF1P22415 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.98□□□□□ -1.61
USF1P22415 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USF1P22415 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
USF1P22415 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USF1P22415 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USF1P22415 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USF1P22415 SNORD1C-201ENST00000363315 78 ntBASIC4.97□□□□□ -1.61
USF1P22415 AL050305.1-201ENST00000399993 1230 ntBASIC4.97□□□□□ -1.61
USF1P22415 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 Z93019.1-201ENST00000416450 973 ntBASIC4.97□□□□□ -1.61
USF1P22415 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.97□□□□□ -1.61
USF1P22415 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms