Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC019322.1-201ENST00000571869 389 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 AL034549.2-201ENST00000618285 3373 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.35□□□□□ -1.55
MT-ND1P03886 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 PSG10P-201ENST00000501199 1500 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 RN7SKP81-201ENST00000365603 331 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
MT-ND1P03886 RNA5SP187-201ENST00000384400 119 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
MT-ND1P03886 PEX12P1-201ENST00000400284 1048 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 GPS2P1-201ENST00000411761 986 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AL445213.1-201ENST00000412589 747 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 CDY17P-201ENST00000414121 1282 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 VN1R3-201ENST00000418822 919 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AC234781.4-201ENST00000419384 244 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 VN1R21P-201ENST00000426703 765 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 CDY8P-201ENST00000428380 1279 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.35□□□□□ -1.55
MT-ND1P03886 GAPDHP59-201ENST00000435908 267 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AL353662.1-201ENST00000439099 327 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.35□□□□□ -1.55
MT-ND1P03886 CDY20P-201ENST00000447528 1279 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 MTND4LP12-201ENST00000448237 295 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 RN7SL269P-201ENST00000467795 305 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 AC012123.2-201ENST00000485809 248 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 SNORA70.11-201ENST00000515987 138 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 SNORA70.13-201ENST00000516116 138 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AP004609.2-201ENST00000532177 190 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AC139697.1-201ENST00000548429 745 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.35□□□□□ -1.55
MT-ND1P03886 AC068768.2-201ENST00000602352 343 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.35□□□□□ -1.55
MT-ND1P03886 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.35□□□□□ -1.55
MT-ND1P03886 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.35□□□□□ -1.55
MT-ND1P03886 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.35□□□□□ -1.55
MT-ND1P03886 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 AL360270.2-201ENST00000562952 5985 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MT-ND1P03886 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
MT-ND1P03886 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC245100.2-201ENST00000454544 1679 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC009962.1-201ENST00000567327 3813 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC005261.6-201ENST00000623072 1387 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 SELENOWP1-201ENST00000322792 252 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 OR56A4-201ENST00000330728 1209 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC005042.1-201ENST00000393397 800 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 RPL35AP3-201ENST00000414680 288 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 HYALP1-201ENST00000417674 1279 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 THEM7P-201ENST00000419556 672 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.34□□□□□ -1.55
MT-ND1P03886 MTCO3P17-201ENST00000443775 513 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 RN7SL568P-201ENST00000493069 298 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms