Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 RN7SL808P-201ENST00000496066 299 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC072052.1-201ENST00000496556 306 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.73□□□□□ -1.33
COL1A1P02452 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
COL1A1P02452 AP001804.1-201ENST00000526868 919 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.73□□□□□ -1.33
COL1A1P02452 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.73□□□□□ -1.33
COL1A1P02452 OR11J2P-201ENST00000555298 907 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AP002884.5-201ENST00000595053 1132 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 MIR6748-201ENST00000610433 71 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.72□□□□□ -1.33
COL1A1P02452 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 ZNF658B-201ENST00000602828 3408 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 AC092070.2-203ENST00000598377 3644 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.72□□□□□ -1.33
COL1A1P02452 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL1A1P02452 MTHFD2P5-201ENST00000320415 844 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 RN7SKP115-201ENST00000363177 317 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 MIR765-201ENST00000390226 114 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AL645733.1-201ENST00000402250 217 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AL589647.1-201ENST00000402485 466 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AC096921.1-201ENST00000411661 375 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.72□□□□□ -1.33
COL1A1P02452 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.72□□□□□ -1.33
COL1A1P02452 RN7SKP253-201ENST00000516424 309 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AC078878.1-201ENST00000539832 958 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 NMNAT1P5-201ENST00000559657 841 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.72□□□□□ -1.33
COL1A1P02452 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.72□□□□□ -1.33
COL1A1P02452 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL1A1P02452 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.72□□□□□ -1.33
COL1A1P02452 AC068870.1-201ENST00000563737 2455 ntBASIC6.72□□□□□ -1.33
COL1A1P02452 AC093829.1-201ENST00000506662 1618 ntBASIC6.71□□□□□ -1.33
COL1A1P02452 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL1A1P02452 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL1A1P02452 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL1A1P02452 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL1A1P02452 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.71□□□□□ -1.34
COL1A1P02452 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
COL1A1P02452 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL1A1P02452 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL1A1P02452 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 AC103591.2-201ENST00000265259 766 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
COL1A1P02452 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.71□□□□□ -1.34
COL1A1P02452 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.71□□□□□ -1.34
COL1A1P02452 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.71□□□□□ -1.34
COL1A1P02452 MORF4L1P4-201ENST00000450245 976 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.71□□□□□ -1.34
COL1A1P02452 AC137627.1-201ENST00000545761 289 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.71□□□□□ -1.34
COL1A1P02452 AC106730.2-201ENST00000566641 540 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.71□□□□□ -1.34
COL1A1P02452 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.71□□□□□ -1.34
COL1A1P02452 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL1A1P02452 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL1A1P02452 AC023421.1-201ENST00000590535 1785 ntBASIC6.71□□□□□ -1.34
COL1A1P02452 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL1A1P02452 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
COL1A1P02452 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL1A1P02452 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 RNU4-2-201ENST00000365668 141 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 OR4K12P-201ENST00000406538 961 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 BX679664.2-201ENST00000439282 283 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms