Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.17□□□□□ -1.42
CNOT4O95628 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 FO082842.1-201ENST00000423552 1370 ntBASIC6.17□□□□□ -1.42
CNOT4O95628 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CNOT4O95628 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNOT4O95628 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 CASC19-243ENST00000641588 1546 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 LDHAP5-201ENST00000394996 622 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 HMGB3P7-201ENST00000400214 611 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 NUDT19P3-201ENST00000404698 555 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 AL158825.1-201ENST00000414735 521 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 RPS26P13-201ENST00000419030 330 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 PTP4A1P5-201ENST00000420305 455 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 EEF1A1P39-201ENST00000440791 250 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 OR51P1P-201ENST00000447547 942 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 TRY2P-201ENST00000448860 689 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 OR52J1P-201ENST00000450596 932 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 RPS6P2-201ENST00000454208 705 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC005410.1-202ENST00000460347 485 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 RN7SL372P-201ENST00000461982 298 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC021205.1-201ENST00000468797 348 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 MTND3P7-201ENST00000474435 343 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 RN7SL350P-201ENST00000492591 299 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL117692.1-201ENST00000494283 713 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 BTG4P1-201ENST00000510421 183 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC116353.3-201ENST00000511215 249 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 MTND3P5-201ENST00000512798 333 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 AC092593.2-201ENST00000513866 913 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 MTCO2P32-201ENST00000514865 403 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 SETP1-201ENST00000556014 845 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC010546.1-201ENST00000569391 485 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 AC111186.1-201ENST00000604684 130 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AP002360.4-201ENST00000606980 481 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 MIR6885-201ENST00000612241 66 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC015819.1-201ENST00000613588 663 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AL354976.1-201ENST00000613843 387 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 AC026951.2-201ENST00000613847 241 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 AL158163.2-201ENST00000619110 700 ntBASIC6.16□□□□□ -1.42
CNOT4O95628 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNOT4O95628 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms