Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPA2P1-201ENST00000556557 721 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC005244.1-201ENST00000582566 339 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC009779.8-202ENST00000607990 932 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC092953.2-201ENST00000608000 699 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 MIR6809-201ENST00000612189 116 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC245014.3-201ENST00000618589 347 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AC253576.2-201ENST00000618815 580 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AL445670.1-201ENST00000618889 801 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 AP006248.3-201ENST00000623580 594 ntBASIC5.5□□□□□ -1.53
NKX2-2O95096 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NKX2-2O95096 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-2O95096 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-2O95096 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AL669831.5-218ENST00000591702 1873 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC093225.1-201ENST00000506867 1408 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-2O95096 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 COX6B1P3-201ENST00000312310 260 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RNU1-65P-201ENST00000363919 148 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RN7SKP128-201ENST00000364270 303 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 RNA5SP431-201ENST00000410312 120 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 PTP4A1P1-201ENST00000420539 515 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC092651.1-201ENST00000426110 312 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RPL12P16-201ENST00000431098 498 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC007679.3-201ENST00000434035 414 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RPS12P17-201ENST00000438591 377 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC023194.2-201ENST00000465398 406 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 RPL38P3-201ENST00000484463 213 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-2O95096 HMGB1P46-201ENST00000520062 610 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC006512.2-201ENST00000543250 486 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC002310.3-201ENST00000569728 723 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC090236.2-201ENST00000587933 1101 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 PPATP2-201ENST00000605635 508 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC084824.5-201ENST00000612009 413 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AL021918.2-201ENST00000613415 194 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 AC132825.1-201ENST00000463573 2247 ntBASIC5.49□□□□□ -1.53
NKX2-2O95096 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-2O95096 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-2O95096 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
NKX2-2O95096 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX2-2O95096 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
NKX2-2O95096 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX2-2O95096 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NKX2-2O95096 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NKX2-2O95096 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX2-2O95096 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NKX2-2O95096 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NKX2-2O95096 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX2-2O95096 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NKX2-2O95096 RNFT1P3-201ENST00000340898 1052 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-2O95096 RNA5SP105-201ENST00000391123 113 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 GSTA12P-201ENST00000402398 508 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 AC016739.1-201ENST00000405359 345 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX2-2O95096 BTF3P9-201ENST00000418784 283 ntBASIC5.48□□□□□ -1.53
NKX2-2O95096 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms