Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SMAD6O43541 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SMAD6O43541 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 MTHFD2P5-201ENST00000320415 844 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 RNU1-59P-201ENST00000364829 162 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SMAD6O43541 AL121835.1-201ENST00000404250 354 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 RPL34P27-201ENST00000428810 349 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 SUMO2P3-201ENST00000438311 288 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 RPL36AP39-201ENST00000445859 318 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 PPIAP19-201ENST00000486414 492 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 IGLVIV-64-201ENST00000518581 301 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
SMAD6O43541 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 AC067805.1-201ENST00000559344 470 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AL132657.2-201ENST00000564417 358 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.94□□□□□ -1.46
SMAD6O43541 AC015802.2-201ENST00000589690 189 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AL161912.3-201ENST00000605404 628 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 U1.25-201ENST00000614085 162 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AL355974.3-201ENST00000617383 467 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 U1.34-201ENST00000618578 162 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 AL445670.1-201ENST00000618889 801 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 U1.31-201ENST00000620022 160 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 AC008691.1-209ENST00000642094 814 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.94□□□□□ -1.46
SMAD6O43541 MFSD8-219ENST00000641228 2559 ntBASIC5.94□□□□□ -1.46
SMAD6O43541 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SMAD6O43541 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SMAD6O43541 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
SMAD6O43541 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMAD6O43541 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC114876.1-201ENST00000490962 1366 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMAD6O43541 KARSP1-201ENST00000451871 1752 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMAD6O43541 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMAD6O43541 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMAD6O43541 TMSB4XP4-201ENST00000323496 618 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.93□□□□□ -1.46
SMAD6O43541 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 AL445213.1-201ENST00000412589 747 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC127526.2-201ENST00000426436 775 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 BX119321.1-201ENST00000428912 797 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 GAPDHP48-201ENST00000436626 961 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 SCAND3P1-201ENST00000439854 1060 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 CYCSP53-201ENST00000455540 265 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC099521.1-201ENST00000482557 334 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 RPL7P51-201ENST00000490532 749 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC104109.1-201ENST00000498563 436 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.93□□□□□ -1.46
SMAD6O43541 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC112184.1-201ENST00000505179 312 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 SNORA70.20-201ENST00000516848 126 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AC079600.1-201ENST00000550326 297 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 AL049779.3-201ENST00000557141 606 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMAD6O43541 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC005229.3-201ENST00000603438 323 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.93□□□□□ -1.46
SMAD6O43541 AC127024.6-201ENST00000621598 424 ntBASIC5.93□□□□□ -1.46
SMAD6O43541 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.93□□□□□ -1.46
SMAD6O43541 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMAD6O43541 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms