Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.23□□□□□ -1.25
CHL1O00533 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.23□□□□□ -1.25
CHL1O00533 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.23□□□□□ -1.25
CHL1O00533 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.23□□□□□ -1.25
CHL1O00533 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.23□□□□□ -1.25
CHL1O00533 AC011225.1-201ENST00000457751 369 ntBASIC7.23□□□□□ -1.25
CHL1O00533 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 AC108693.1-201ENST00000496068 432 ntBASIC7.23□□□□□ -1.25
CHL1O00533 AC090638.1-201ENST00000498296 909 ntBASIC7.23□□□□□ -1.25
CHL1O00533 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.23□□□□□ -1.25
CHL1O00533 ST13P12-201ENST00000508958 1094 ntBASIC7.23□□□□□ -1.25
CHL1O00533 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CHL1O00533 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.23□□□□□ -1.25
CHL1O00533 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.23□□□□□ -1.25
CHL1O00533 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.23□□□□□ -1.25
CHL1O00533 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.23□□□□□ -1.25
CHL1O00533 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.23□□□□□ -1.25
CHL1O00533 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CHL1O00533 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CHL1O00533 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CHL1O00533 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.23□□□□□ -1.25
CHL1O00533 AC068870.1-201ENST00000563737 2455 ntBASIC7.23□□□□□ -1.25
CHL1O00533 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CHL1O00533 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHL1O00533 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.22□□□□□ -1.25
CHL1O00533 CASC19-248ENST00000641674 1356 ntBASIC7.22□□□□□ -1.25
CHL1O00533 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHL1O00533 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHL1O00533 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 RN7SL547P-201ENST00000490793 290 ntBASIC7.22□□□□□ -1.25
CHL1O00533 EIF3LP3-201ENST00000495197 822 ntBASIC7.22□□□□□ -1.25
CHL1O00533 RPS17P5-201ENST00000498293 408 ntBASIC7.22□□□□□ -1.25
CHL1O00533 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 AC027026.1-201ENST00000532323 742 ntBASIC7.22□□□□□ -1.25
CHL1O00533 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 AC079395.2-201ENST00000610982 737 ntBASIC7.22□□□□□ -1.25
CHL1O00533 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CHL1O00533 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHL1O00533 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CHL1O00533 CIR1P2-201ENST00000514821 1342 ntBASIC7.22□□□□□ -1.25
CHL1O00533 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CHL1O00533 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 HSPD1P7-201ENST00000447985 1686 ntBASIC7.22□□□□□ -1.25
CHL1O00533 AC034229.2-201ENST00000566945 2508 ntBASIC7.22□□□□□ -1.25
CHL1O00533 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHL1O00533 AC006206.1-201ENST00000544842 3387 ntBASIC7.22□□□□□ -1.25
CHL1O00533 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHL1O00533 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHL1O00533 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.21□□□□□ -1.25
CHL1O00533 AC009962.1-201ENST00000567327 3813 ntBASIC7.21□□□□□ -1.25
CHL1O00533 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CHL1O00533 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.21□□□□□ -1.26
CHL1O00533 RN7SKP6-201ENST00000364795 319 ntBASIC7.21□□□□□ -1.26
CHL1O00533 RNU4-2-201ENST00000365668 141 ntBASIC7.21□□□□□ -1.26
CHL1O00533 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.21□□□□□ -1.26
CHL1O00533 MTND4LP17-201ENST00000414607 293 ntBASIC7.21□□□□□ -1.26
CHL1O00533 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.21□□□□□ -1.26
CHL1O00533 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.21□□□□□ -1.26
CHL1O00533 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC7.21□□□□□ -1.26
CHL1O00533 AC018638.3-201ENST00000461273 132 ntBASIC7.21□□□□□ -1.26
CHL1O00533 AC009237.13-201ENST00000603193 276 ntBASIC7.21□□□□□ -1.26
CHL1O00533 SUGT1P3-202ENST00000604259 383 ntBASIC7.21□□□□□ -1.26
CHL1O00533 AC010809.3-201ENST00000621310 641 ntBASIC7.21□□□□□ -1.26
CHL1O00533 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.21□□□□□ -1.26
CHL1O00533 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.21□□□□□ -1.26
CHL1O00533 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 KYNUP3-201ENST00000574386 1341 ntBASIC7.21□□□□□ -1.26
CHL1O00533 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHL1O00533 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms