Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 NANOGP9-201ENST00000439890 892 ntBASIC4.54□□□□□ -1.68
UPK2O00526 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 EEF1B2P3-201ENST00000447718 678 ntBASIC4.54□□□□□ -1.68
UPK2O00526 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 AC083899.1-201ENST00000454465 3819 ntBASIC4.54□□□□□ -1.68
UPK2O00526 RPL32P33-201ENST00000487023 394 ntBASIC4.54□□□□□ -1.68
UPK2O00526 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 AC105420.1-201ENST00000504389 582 ntBASIC4.54□□□□□ -1.68
UPK2O00526 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK2O00526 RN7SKP253-201ENST00000516424 309 ntBASIC4.54□□□□□ -1.68
UPK2O00526 SCARNA6.1-201ENST00000516989 238 ntBASIC4.54□□□□□ -1.68
UPK2O00526 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 PMS2P3-207ENST00000529061 717 ntBASIC4.54□□□□□ -1.68
UPK2O00526 AC084121.1-201ENST00000533882 835 ntBASIC4.54□□□□□ -1.68
UPK2O00526 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK2O00526 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK2O00526 AL139124.1-201ENST00000609123 421 ntBASIC4.54□□□□□ -1.68
UPK2O00526 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.54□□□□□ -1.68
UPK2O00526 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK2O00526 LYARP1-201ENST00000436977 1501 ntBASIC4.54□□□□□ -1.68
UPK2O00526 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
UPK2O00526 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK2O00526 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 ABCC13-202ENST00000463099 3842 ntBASIC4.54□□□□□ -1.68
UPK2O00526 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK2O00526 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPK2O00526 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
UPK2O00526 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
UPK2O00526 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 AC090181.3-201ENST00000624777 1514 ntBASIC4.53□□□□□ -1.68
UPK2O00526 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPK2O00526 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 RN7SKP171-201ENST00000364417 303 ntBASIC4.53□□□□□ -1.68
UPK2O00526 RNA5SP500-201ENST00000364486 119 ntBASIC4.53□□□□□ -1.68
UPK2O00526 U3.23-201ENST00000391132 200 ntBASIC4.53□□□□□ -1.68
UPK2O00526 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 LSM3P4-201ENST00000502948 309 ntBASIC4.53□□□□□ -1.68
UPK2O00526 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK2O00526 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 AC002310.3-201ENST00000569728 723 ntBASIC4.53□□□□□ -1.68
UPK2O00526 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK2O00526 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK2O00526 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK2O00526 RNU6-84P-201ENST00000607737 102 ntBASIC4.53□□□□□ -1.68
UPK2O00526 AC021766.1-201ENST00000624404 741 ntBASIC4.53□□□□□ -1.68
UPK2O00526 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPK2O00526 AC022919.1-201ENST00000624979 626 ntBASIC4.53□□□□□ -1.68
UPK2O00526 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK2O00526 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK2O00526 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.53□□□□□ -1.69
UPK2O00526 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK2O00526 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK2O00526 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms