Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CCNB1IP1P1-201ENST00000428976 839 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC073465.2-201ENST00000440938 498 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 UBBP5-201ENST00000446970 266 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC097463.1-201ENST00000447288 481 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL590648.1-201ENST00000456479 460 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC006539.1-201ENST00000481419 501 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC083829.1-201ENST00000503756 657 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 EIF3KP1-201ENST00000513279 656 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SCARNA11.1-201ENST00000516918 132 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AP002981.1-201ENST00000517692 975 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AP005902.2-201ENST00000518393 307 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC018442.3-201ENST00000523025 183 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090312.1-201ENST00000580637 348 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC011193.2-201ENST00000582638 367 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL139286.1-201ENST00000604465 483 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SNORA74.4-201ENST00000607595 199 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC002470.1-201ENST00000610278 395 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 uc_338.18-201ENST00000615451 175 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC015914.2-201ENST00000618167 288 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 uc_338.7-201ENST00000621834 124 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AP002967.1-201ENST00000624203 539 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PSMC1P6-201ENST00000477233 1319 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MTND5P23-201ENST00000430812 1655 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP263-201ENST00000363376 128 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 SNORA48.4-201ENST00000391089 134 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005042.1-201ENST00000393397 800 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005522.1-201ENST00000395416 346 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL390039.1-201ENST00000399148 611 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL050305.1-201ENST00000399993 1230 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 HSPD1P16-201ENST00000402302 394 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL590609.2-201ENST00000421430 368 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL357520.1-201ENST00000441557 453 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 IGBP1P3-201ENST00000447449 1000 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL162388.1-201ENST00000450912 352 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 DBIL5P-202ENST00000453414 250 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 NXT1P1-201ENST00000458481 316 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL587P-201ENST00000459853 281 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL815P-201ENST00000470970 290 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms