Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AL591167.1-201ENST00000607321 456 ntBASIC6.29□□□□□ -1.4
DKK3Q9UBP4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AC010608.3-201ENST00000625048 527 ntBASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AC010266.2-201ENST00000564741 3255 ntBASIC6.29□□□□□ -1.4
DKK3Q9UBP4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 CASC19-255ENST00000641733 1385 ntBASIC6.29□□□□□ -1.4
DKK3Q9UBP4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DKK3Q9UBP4 AL133243.2-201ENST00000610331 1621 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC104966.1-201ENST00000467010 1464 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AL353692.2-201ENST00000407054 335 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 OR13Z1P-201ENST00000416141 834 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC097463.1-201ENST00000447288 481 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC092967.1-201ENST00000449016 481 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 RANP2-201ENST00000456833 229 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 RN7SL72P-201ENST00000460697 269 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC108729.2-201ENST00000476543 840 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 OR7E99P-201ENST00000505750 922 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC009879.1-201ENST00000520029 839 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 CD24P2-201ENST00000565486 219 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 TXNP4-201ENST00000575018 310 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 FAM60CP-201ENST00000591086 664 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AL356118.1-201ENST00000635272 1078 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 QRSL1P1-201ENST00000400977 1540 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC105749.1-201ENST00000631338 2008 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 HSPD1P9-201ENST00000420325 1636 ntBASIC6.28□□□□□ -1.4
DKK3Q9UBP4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.28□□□□□ -1.4
DKK3Q9UBP4 DDX18P6-201ENST00000450119 1997 ntBASIC6.27□□□□□ -1.4
DKK3Q9UBP4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
DKK3Q9UBP4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.27□□□□□ -1.4
DKK3Q9UBP4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC007618.1-201ENST00000366455 732 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 SNORA70H-201ENST00000383910 135 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 SNORA70J-201ENST00000384182 135 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 RNU11-6P-201ENST00000391127 133 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL445238.1-204ENST00000400311 463 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC130360.1-201ENST00000425489 1117 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC021876.1-201ENST00000425959 359 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 RPL12P16-201ENST00000431098 498 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 PNKDP1-201ENST00000435914 430 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 OR3D1P-201ENST00000438288 955 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 SEPT7P3-201ENST00000455017 621 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC009963.3-201ENST00000458090 486 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC091544.1-201ENST00000484702 348 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 RPEP1-201ENST00000504507 658 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 VTA1P2-201ENST00000520205 911 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC130365.2-201ENST00000525882 1201 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms