Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC118282.1-201ENST00000506408 765 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 CYCSP22-201ENST00000517555 339 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 MIR193BHG-214ENST00000641765 509 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AC022417.1-201ENST00000624768 1303 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 OR13C1P-202ENST00000641378 2919 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC083799.1-201ENST00000366451 910 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 OR7E101P-201ENST00000400428 513 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 RN7SKP293-201ENST00000411389 296 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 GTF3AP1-201ENST00000416942 1004 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 NMD3P2-201ENST00000421815 761 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 KIF4CP-201ENST00000422742 1279 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SETP10-201ENST00000424368 814 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AL121776.1-201ENST00000429337 372 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 FCF1P7-201ENST00000451185 558 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 RPS27AP3-201ENST00000453803 454 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC007386.1-201ENST00000455212 582 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC002075.1-201ENST00000457396 676 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SNRPCP3-201ENST00000474888 476 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC008629.2-201ENST00000503783 483 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC090022.1-201ENST00000546569 311 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC022404.1-201ENST00000555320 273 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 OR4H6P-201ENST00000563771 921 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC020916.2-201ENST00000591242 360 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AP001267.4-201ENST00000602598 545 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC005229.3-201ENST00000603438 323 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC097520.1-201ENST00000624435 385 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
EBF3Q9H4W6 PDZK1P1-202ENST00000425209 1350 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 AC096921.2-201ENST00000561507 1916 ntBASIC6.17□□□□□ -1.42
EBF3Q9H4W6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AL731532.1-201ENST00000623972 4236 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 OR5T3-201ENST00000303059 1023 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 RNA5SP500-201ENST00000364486 119 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 MARK2P12-201ENST00000420129 585 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 NDUFA5P8-201ENST00000449019 346 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 RNA5SP362-201ENST00000516048 118 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 MIR4489-201ENST00000578869 62 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AP001496.3-201ENST00000580230 913 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms