Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 FAM27E2-201ENST00000619668 403 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 SNORD16-201ENST00000362803 99 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 RNU11-6P-201ENST00000391127 133 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 AL391361.1-201ENST00000405580 489 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AL136038.1-201ENST00000497246 351 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 TMEM97P2-201ENST00000517841 403 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC027026.1-201ENST00000532323 742 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC068993.1-201ENST00000546724 589 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC005332.4-201ENST00000592752 579 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC069542.2-201ENST00000624816 216 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 AC002525.1-201ENST00000624392 1622 ntBASIC5.94□□□□□ -1.46
TRIM4Q9C037 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM4Q9C037 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM4Q9C037 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 HDAC1P2-201ENST00000453661 1398 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC114876.1-201ENST00000490962 1366 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 OR9K1P-201ENST00000326513 941 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 SNORD1C-201ENST00000363315 78 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 MIR105-2-201ENST00000385083 81 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC015977.1-201ENST00000418887 292 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 RPS7P14-201ENST00000426405 583 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC099670.2-201ENST00000435130 321 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC083899.1-201ENST00000454465 3819 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 IGKV2-18-201ENST00000522607 343 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 MIR3176-201ENST00000582210 90 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC073333.2-201ENST00000603589 769 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 RN7SL787P-201ENST00000613000 284 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC073869.7-201ENST00000640874 297 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 MAPK10-350ENST00000641777 965 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AL161756.3-201ENST00000641216 2071 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AP001029.2-203ENST00000589795 4910 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 AC018717.1-201ENST00000457712 1505 ntBASIC5.93□□□□□ -1.46
TRIM4Q9C037 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TRIM4Q9C037 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM4Q9C037 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms