Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.81□□□□□ -1.48
NDNQ99608 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
NDNQ99608 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NDNQ99608 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 RNFT1P3-201ENST00000340898 1052 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 CRIP1P1-201ENST00000427567 185 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC096775.1-201ENST00000437724 448 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 ATP5LP2-201ENST00000440646 311 ntBASIC5.8□□□□□ -1.48
NDNQ99608 RPL6P30-201ENST00000443382 862 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 AC005077.1-201ENST00000449226 375 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 YRDCP3-201ENST00000456507 480 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC090589.1-201ENST00000473109 362 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC092865.4-201ENST00000477936 615 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 AL133372.1-201ENST00000493565 745 ntBASIC5.8□□□□□ -1.48
NDNQ99608 PRMT5P1-201ENST00000514351 598 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 RNA5SP340-201ENST00000517132 107 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.8□□□□□ -1.48
NDNQ99608 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.8□□□□□ -1.48
NDNQ99608 AC060780.2-201ENST00000589047 198 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 AL591926.1-201ENST00000620542 217 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AL353684.1-201ENST00000622677 1120 ntBASIC5.8□□□□□ -1.48
NDNQ99608 AL683826.1-201ENST00000624104 627 ntBASIC5.8□□□□□ -1.48
NDNQ99608 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 CASC19-274ENST00000642018 970 ntBASIC5.8□□□□□ -1.48
NDNQ99608 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
NDNQ99608 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.8□□□□□ -1.48
NDNQ99608 AC093225.1-201ENST00000506867 1408 ntBASIC5.8□□□□□ -1.48
NDNQ99608 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NDNQ99608 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.79□□□□□ -1.48
NDNQ99608 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.79□□□□□ -1.48
NDNQ99608 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NDNQ99608 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.79□□□□□ -1.48
NDNQ99608 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NDNQ99608 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 RNA5SP91-201ENST00000390902 119 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AC240504.1-201ENST00000395709 845 ntBASIC5.79□□□□□ -1.48
NDNQ99608 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NDNQ99608 RNA5SP431-201ENST00000410312 120 ntBASIC5.79□□□□□ -1.48
NDNQ99608 CASKP1-201ENST00000412870 582 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.79□□□□□ -1.48
NDNQ99608 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.79□□□□□ -1.48
NDNQ99608 AC015983.1-201ENST00000441577 373 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AC093166.4-201ENST00000457867 318 ntBASIC5.79□□□□□ -1.48
NDNQ99608 RNU1-88P-201ENST00000459274 128 ntBASIC5.79□□□□□ -1.48
NDNQ99608 RNU6-775P-201ENST00000459318 96 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.79□□□□□ -1.48
NDNQ99608 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.79□□□□□ -1.48
NDNQ99608 AC111000.6-201ENST00000514471 709 ntBASIC5.79□□□□□ -1.48
NDNQ99608 RNA5SP230-201ENST00000517039 122 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.79□□□□□ -1.48
NDNQ99608 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.79□□□□□ -1.48
NDNQ99608 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.79□□□□□ -1.48
NDNQ99608 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.79□□□□□ -1.48
NDNQ99608 AC005244.1-201ENST00000582566 339 ntBASIC5.79□□□□□ -1.48
NDNQ99608 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.79□□□□□ -1.48
NDNQ99608 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.79□□□□□ -1.48
NDNQ99608 COX6CP7-201ENST00000597056 208 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 450.8 ms