Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 DLEU2L-201ENST00000371086 3555 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 NCLP2-201ENST00000416078 1462 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR10D1P-201ENST00000355343 936 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 RN7SKP47-201ENST00000365347 328 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ELOCP17-201ENST00000414751 326 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AL031667.1-201ENST00000440222 725 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC084754.1-201ENST00000463466 464 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC092045.1-201ENST00000495716 1231 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 NRON-201ENST00000517270 370 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 MTCYBP19-201ENST00000517463 1124 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR4A21P-201ENST00000532759 944 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC244502.2-201ENST00000543361 851 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 OR11H3P-201ENST00000554547 982 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC010287.1-201ENST00000566916 357 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC134669.1-201ENST00000581275 672 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC111186.1-201ENST00000604684 130 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC007204.2-201ENST00000615022 616 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 MRPL57P3-201ENST00000619218 176 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC127070.3-201ENST00000503695 3263 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ZNF101P1-201ENST00000435701 1720 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 API5P1-201ENST00000424316 1510 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC007993.1-201ENST00000621298 2430 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 RN7SKP189-201ENST00000365042 330 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC010385.1-201ENST00000412374 256 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 TAF13P2-201ENST00000416876 286 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 GTF2IP14-201ENST00000441415 586 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms