Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
RTN4IP1Q8WWV3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC117409.1-201ENST00000470499 1310 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 LYARP1-201ENST00000436977 1501 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC092681.1-201ENST00000297369 291 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 RNFT1P3-201ENST00000340898 1052 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 RNA5SP187-201ENST00000384400 119 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL096711.1-201ENST00000404780 554 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 GPS2P1-201ENST00000411761 986 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL133482.1-201ENST00000415988 498 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 DPPA2P2-201ENST00000418220 897 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL136231.1-201ENST00000429407 730 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC069154.1-201ENST00000432914 542 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 LSM3P4-201ENST00000502948 309 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 SETP21-201ENST00000514799 892 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 WBP1LP3-201ENST00000523033 208 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AP004609.2-201ENST00000532177 190 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 CYCSP38-201ENST00000559840 322 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC002069.2-201ENST00000603580 883 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC145423.1-201ENST00000605712 336 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC108673.3-201ENST00000609183 335 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AL139099.4-201ENST00000614802 114 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC073593.1-201ENST00000624500 411 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 AC004158.1-201ENST00000564508 4319 ntBASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RTN4IP1Q8WWV3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.78□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 RPS2P45-201ENST00000469997 2057 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PARP4P2-201ENST00000446672 3326 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL360270.2-201ENST00000562952 5985 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PEX12P1-201ENST00000400284 1048 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 NPM1P38-201ENST00000403835 865 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02210-201ENST00000444561 288 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SL168P-201ENST00000463821 279 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 RPS7P6-201ENST00000485777 579 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 RNA5SP340-201ENST00000517132 107 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 OR4A17P-201ENST00000526032 904 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC137627.1-201ENST00000545761 289 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 MIR4776-2-201ENST00000580204 80 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC010503.3-201ENST00000594355 540 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 MIR6793-201ENST00000612376 63 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL162574.1-201ENST00000615702 950 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AC021766.1-201ENST00000624404 741 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 AL078595.2-201ENST00000605309 1780 ntBASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms