Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AC090607.5-201ENST00000615692 224 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 SNORA17.5-201ENST00000630429 132 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AC011933.2-201ENST00000578539 2790 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AL359955.1-201ENST00000455242 3275 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 AC020656.2-201ENST00000613291 5309 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf40Q8IXQ3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 RNA5SP46-201ENST00000362370 120 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 KRT8P51-201ENST00000438938 274 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC090602.1-201ENST00000469695 252 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 RN7SL273P-201ENST00000481561 299 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 RPL7P51-201ENST00000490532 749 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC027544.3-201ENST00000535082 757 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 HIRAP1-201ENST00000605318 787 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 RNA5SP440-201ENST00000612665 119 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AC126175.1-201ENST00000617041 758 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL035661.1-201ENST00000620459 1144 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL357153.4-201ENST00000620487 1016 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL390318.1-201ENST00000624564 687 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 KARSP1-201ENST00000451871 1752 ntBASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf40Q8IXQ3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 MIR133A2-201ENST00000347538 102 ntBASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf40Q8IXQ3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms