Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.52□□□□□ -1.36
HERC6Q8IVU3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC109780.1-201ENST00000451768 1344 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 ZNF402P-201ENST00000404435 3100 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AL731556.1-201ENST00000394628 3711 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 C4BPAP1-201ENST00000415474 1893 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AL353625.1-202ENST00000366273 571 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 RNU6-316P-201ENST00000391027 107 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AL391422.1-201ENST00000402155 436 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC016739.1-201ENST00000405359 345 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 SNRPEP6-201ENST00000407465 277 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AL358178.1-201ENST00000407698 397 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 CR848007.2-201ENST00000424918 787 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AL662874.1-201ENST00000426065 230 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 PTMAP6-201ENST00000439110 327 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 LRRC37A14P-201ENST00000452297 462 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 GAPDHP71-201ENST00000511530 1003 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC026688.1-201ENST00000520639 1168 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AP005639.1-201ENST00000526939 192 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC027229.1-201ENST00000583887 253 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC091193.1-201ENST00000604640 448 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC009032.1-201ENST00000617574 431 ntBASIC6.52□□□□□ -1.37
HERC6Q8IVU3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.52□□□□□ -1.37
HERC6Q8IVU3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AC117409.1-201ENST00000470499 1310 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 SELENOWP1-201ENST00000322792 252 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 MIR365B-201ENST00000362317 111 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RNU105B-201ENST00000364478 208 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RNU6-171P-201ENST00000384354 107 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AP000534.2-201ENST00000412729 568 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RPS15AP30-201ENST00000420976 390 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AK3P5-201ENST00000432033 519 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AC093270.2-201ENST00000486157 792 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RN7SL184P-201ENST00000488308 297 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RNU6-319P-201ENST00000516025 108 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 OR56A7P-201ENST00000524865 941 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AC026367.3-201ENST00000619032 590 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AL163152.1-201ENST00000642001 374 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 AC110373.1-201ENST00000505994 3505 ntBASIC6.51□□□□□ -1.37
HERC6Q8IVU3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HERC6Q8IVU3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms