Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 AC092944.2-201ENST00000605443 889 ntBASIC6.27□□□□□ -1.41
USP41Q3LFD5 AL021368.1-201ENST00000607490 540 ntBASIC6.27□□□□□ -1.41
USP41Q3LFD5 AC239803.2-201ENST00000610161 430 ntBASIC6.27□□□□□ -1.41
USP41Q3LFD5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP41Q3LFD5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP41Q3LFD5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP41Q3LFD5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP41Q3LFD5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USP41Q3LFD5 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC027279.4-201ENST00000624371 2072 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 SNORA64.1-201ENST00000362600 132 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 RNU4-23P-201ENST00000362839 140 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 HMGA1P8-201ENST00000414130 321 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 RANP7-201ENST00000418085 644 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 RPS17P17-201ENST00000419392 409 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AL662874.1-201ENST00000426065 230 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 AL022331.1-201ENST00000429025 477 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 HMGB3P24-201ENST00000433260 622 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 Z84478.1-201ENST00000438230 1219 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC002075.1-201ENST00000457396 676 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 ACA64.4-201ENST00000459070 127 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 RPS26P39-201ENST00000469206 341 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC138866.2-201ENST00000508650 584 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 SNORA43.3-201ENST00000517240 103 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 GARSP1-201ENST00000570895 719 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC027334.1-201ENST00000603257 310 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 BNIP3P7-201ENST00000605641 516 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 THAP12P9-201ENST00000503971 2360 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 AC232271.1-201ENST00000602455 2715 ntBASIC6.26□□□□□ -1.41
USP41Q3LFD5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP41Q3LFD5 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
USP41Q3LFD5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 RN7SKP160-201ENST00000363804 340 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 RNA5SP132-201ENST00000364725 118 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 RPS23P6-201ENST00000466136 431 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 OR7E157P-201ENST00000494376 911 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 EIF3LP3-201ENST00000495197 822 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 RNU6-615P-201ENST00000516065 106 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 OR4A40P-201ENST00000533878 948 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AC090286.3-201ENST00000573133 187 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 MIR4489-201ENST00000578869 62 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 AL445670.1-201ENST00000618889 801 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms