Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 RN7SKP145-201ENST00000363291 303 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC108479.1-201ENST00000431142 427 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC096775.1-201ENST00000437724 448 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 TCEA1P3-201ENST00000443005 880 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 PPIAP7-201ENST00000454070 489 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 OR7E157P-201ENST00000494376 911 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 OR7E99P-201ENST00000505750 922 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AP000620.1-201ENST00000527147 504 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC036111.2-201ENST00000533247 901 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 BTG1P1-201ENST00000540396 508 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LSM3P2-201ENST00000551246 273 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC005828.7-201ENST00000607331 556 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL080312.2-201ENST00000613001 630 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AC015819.1-201ENST00000613588 663 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 uc_338.29-201ENST00000615099 168 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 AL445670.1-201ENST00000618889 801 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 GNL2P1-201ENST00000451274 2190 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIST1H1AQ02539 Z95331.1-201ENST00000623075 23112 ntBASIC4.43□□□□□ -1.7
HIST1H1AQ02539 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 RBMY1HP-201ENST00000382759 1389 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 TTC39DP-201ENST00000416781 1688 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AP004607.3-201ENST00000530354 3915 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 RN7SKP185-201ENST00000362813 326 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 YWHAZP6-201ENST00000399764 738 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 RN7SKP108-201ENST00000411367 328 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC023141.3-201ENST00000436698 278 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 RPS7P3-201ENST00000443360 580 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC007383.1-201ENST00000445875 636 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC098847.1-201ENST00000473094 348 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 RN7SL362P-201ENST00000494228 267 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 USP9YP2-201ENST00000504503 1000 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC112484.3-201ENST00000505910 329 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 USP9YP1-201ENST00000513521 1002 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AC110056.1-201ENST00000525759 911 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 OR10D4P-201ENST00000525892 951 ntBASIC4.42□□□□□ -1.7
HIST1H1AQ02539 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HIST1H1AQ02539 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms