Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 AC130360.2-201ENST00000533477 1556 ntBASIC3.89□□□□□ -1.79
RPL39P62891 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPL39P62891 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AC104623.2-202ENST00000623477 4002 ntBASIC3.88□□□□□ -1.79
RPL39P62891 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 AL159987.1-201ENST00000347911 293 ntBASIC3.88□□□□□ -1.79
RPL39P62891 RPL21P67-201ENST00000402896 478 ntBASIC3.88□□□□□ -1.79
RPL39P62891 RNA5SP198-201ENST00000410376 127 ntBASIC3.88□□□□□ -1.79
RPL39P62891 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AL354890.1-201ENST00000413730 346 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPL39P62891 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 TUBB4BP6-201ENST00000437576 479 ntBASIC3.88□□□□□ -1.79
RPL39P62891 PA2G4P1-201ENST00000442248 1197 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AL596266.1-201ENST00000448132 400 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC005077.1-201ENST00000449226 375 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 ENPP7P11-201ENST00000505915 627 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 RN7SL66P-201ENST00000582099 264 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 RN7SL657P-201ENST00000582431 293 ntBASIC3.88□□□□□ -1.79
RPL39P62891 MIR4260-201ENST00000583107 67 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AL136131.3-201ENST00000607600 188 ntBASIC3.88□□□□□ -1.79
RPL39P62891 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC3.88□□□□□ -1.79
RPL39P62891 U91328.4-201ENST00000608919 517 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AL356608.1-201ENST00000610034 820 ntBASIC3.88□□□□□ -1.79
RPL39P62891 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 AC012676.3-201ENST00000614983 479 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC004801.6-201ENST00000616571 978 ntBASIC3.88□□□□□ -1.79
RPL39P62891 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 uc_338.7-201ENST00000621834 124 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC091059.2-201ENST00000623355 614 ntBASIC3.88□□□□□ -1.79
RPL39P62891 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPL39P62891 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPL39P62891 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RPL39P62891 TRIM51GP-201ENST00000534741 1350 ntBASIC3.88□□□□□ -1.79
RPL39P62891 AC004817.4-201ENST00000602396 3625 ntBASIC3.88□□□□□ -1.79
RPL39P62891 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.87□□□□□ -1.79
RPL39P62891 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RPL39P62891 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 MIR431-201ENST00000385266 114 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AL009179.1-201ENST00000406085 265 ntBASIC3.87□□□□□ -1.79
RPL39P62891 RPL12P9-201ENST00000412942 488 ntBASIC3.87□□□□□ -1.79
RPL39P62891 MRPL53P1-201ENST00000414323 319 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC3.87□□□□□ -1.79
RPL39P62891 AC126120.1-201ENST00000431082 470 ntBASIC3.87□□□□□ -1.79
RPL39P62891 LINC00328-2P-201ENST00000436585 219 ntBASIC3.87□□□□□ -1.79
RPL39P62891 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RPL39P62891 AC090804.1-201ENST00000448870 490 ntBASIC3.87□□□□□ -1.79
RPL39P62891 PRPF38AP1-201ENST00000451976 933 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC098847.1-201ENST00000473094 348 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC005017.1-201ENST00000482002 490 ntBASIC3.87□□□□□ -1.79
RPL39P62891 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC3.87□□□□□ -1.79
RPL39P62891 AC016559.2-201ENST00000510759 359 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms