Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN12P56749 AL050305.1-201ENST00000399993 1230 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AL096711.1-201ENST00000404780 554 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AL445213.1-201ENST00000412589 747 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 RPL7AP51-201ENST00000422016 760 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AC092865.3-201ENST00000425390 1026 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 FTLP19-201ENST00000433300 394 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 PCBP2P1-201ENST00000437262 977 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AC073465.2-201ENST00000440938 498 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 UBFD1P1-201ENST00000473259 814 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 RN7SKP253-201ENST00000516424 309 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 AL359219.2-201ENST00000555184 348 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AGGF1P7-201ENST00000562369 913 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AC096996.1-201ENST00000563813 325 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 U91328.4-201ENST00000608919 517 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AL135999.3-201ENST00000610501 812 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN12P56749 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 FRG1EP-201ENST00000634469 770 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 AC010325.3-201ENST00000641084 394 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.88□□□□□ -1.63
CLDN12P56749 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN12P56749 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN12P56749 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN12P56749 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN12P56749 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN12P56749 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN12P56749 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN12P56749 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 RN7SKP29-201ENST00000410957 272 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AL035422.1-201ENST00000414193 397 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN12P56749 NIFKP3-201ENST00000417799 865 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC099521.1-201ENST00000482557 334 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN12P56749 MTCO1P55-201ENST00000489829 745 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC021193.1-201ENST00000511607 420 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN12P56749 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN12P56749 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN12P56749 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN12P56749 RN7SL66P-201ENST00000582099 264 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC092944.2-201ENST00000605443 889 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN12P56749 AC012676.3-201ENST00000614983 479 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC026367.3-201ENST00000619032 590 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AL136228.1-201ENST00000622221 319 ntBASIC4.87□□□□□ -1.63
CLDN12P56749 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN12P56749 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CLDN12P56749 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN12P56749 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms