Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.86□□□□□ -1.31
NUP98P52948 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.86□□□□□ -1.31
NUP98P52948 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.86□□□□□ -1.31
NUP98P52948 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
NUP98P52948 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.86□□□□□ -1.31
NUP98P52948 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NUP98P52948 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NUP98P52948 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NUP98P52948 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NUP98P52948 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.86□□□□□ -1.31
NUP98P52948 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.86□□□□□ -1.31
NUP98P52948 CCDC162P-202ENST00000368966 6751 ntBASIC6.86□□□□□ -1.31
NUP98P52948 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 AL034546.1-201ENST00000623740 3693 ntBASIC6.85□□□□□ -1.31
NUP98P52948 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.85□□□□□ -1.31
NUP98P52948 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 RNU1-136P-201ENST00000384181 164 ntBASIC6.85□□□□□ -1.31
NUP98P52948 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.85□□□□□ -1.31
NUP98P52948 RPS3AP38-201ENST00000435889 763 ntBASIC6.85□□□□□ -1.31
NUP98P52948 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.85□□□□□ -1.31
NUP98P52948 PDCL3P4-201ENST00000489621 720 ntBASIC6.85□□□□□ -1.31
NUP98P52948 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AC073429.2-201ENST00000569694 1444 ntBASIC6.85□□□□□ -1.31
NUP98P52948 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 AC013268.3-201ENST00000262716 2324 ntBASIC6.85□□□□□ -1.31
NUP98P52948 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.85□□□□□ -1.31
NUP98P52948 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.85□□□□□ -1.31
NUP98P52948 AL596266.1-201ENST00000448132 400 ntBASIC6.85□□□□□ -1.31
NUP98P52948 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 AC090114.3-201ENST00000479267 829 ntBASIC6.85□□□□□ -1.31
NUP98P52948 RNA5SP373-201ENST00000517271 95 ntBASIC6.85□□□□□ -1.31
NUP98P52948 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NUP98P52948 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.85□□□□□ -1.31
NUP98P52948 AC068870.1-201ENST00000563737 2455 ntBASIC6.85□□□□□ -1.31
NUP98P52948 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NUP98P52948 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 AC009962.1-201ENST00000567327 3813 ntBASIC6.84□□□□□ -1.31
NUP98P52948 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NUP98P52948 OR4F13P-202ENST00000560066 2054 ntBASIC6.84□□□□□ -1.31
NUP98P52948 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
NUP98P52948 AC112255.1-201ENST00000624070 2493 ntBASIC6.84□□□□□ -1.31
NUP98P52948 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NUP98P52948 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.84□□□□□ -1.31
NUP98P52948 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 AC103591.2-201ENST00000265259 766 ntBASIC6.84□□□□□ -1.31
NUP98P52948 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 SNORA67-201ENST00000384423 137 ntBASIC6.84□□□□□ -1.31
NUP98P52948 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.84□□□□□ -1.31
NUP98P52948 VN1R54P-201ENST00000435210 1049 ntBASIC6.84□□□□□ -1.31
NUP98P52948 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.84□□□□□ -1.31
NUP98P52948 KRT8P51-201ENST00000438938 274 ntBASIC6.84□□□□□ -1.31
NUP98P52948 IGBP1P3-201ENST00000447449 1000 ntBASIC6.84□□□□□ -1.31
NUP98P52948 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.84□□□□□ -1.31
NUP98P52948 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.84□□□□□ -1.31
NUP98P52948 HMGB1P40-201ENST00000525121 540 ntBASIC6.84□□□□□ -1.31
NUP98P52948 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.84□□□□□ -1.31
NUP98P52948 AC027667.1-201ENST00000545814 304 ntBASIC6.84□□□□□ -1.31
NUP98P52948 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.84□□□□□ -1.31
NUP98P52948 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
NUP98P52948 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.84□□□□□ -1.31
NUP98P52948 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NUP98P52948 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
NUP98P52948 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NUP98P52948 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NUP98P52948 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.83□□□□□ -1.32
NUP98P52948 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms