Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 AC048341.3-201ENST00000619323 491 ntBASIC7.54□□□□□ -1.2
USP11P51784 CLUHP10-201ENST00000631979 980 ntBASIC7.54□□□□□ -1.2
USP11P51784 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 AL596244.1-201ENST00000567068 3779 ntBASIC7.54□□□□□ -1.2
USP11P51784 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 MAPK10-344ENST00000641718 3746 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC007012.2-201ENST00000623206 1676 ntBASIC7.54□□□□□ -1.2
USP11P51784 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 PRNCR1-201ENST00000635449 12727 ntBASIC7.53□□□□□ -1.2
USP11P51784 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 AC023490.2-201ENST00000359859 470 ntBASIC7.53□□□□□ -1.2
USP11P51784 Y_RNA.3-201ENST00000362331 103 ntBASIC7.53□□□□□ -1.2
USP11P51784 RNU4-92P-201ENST00000363783 136 ntBASIC7.53□□□□□ -1.2
USP11P51784 AL353625.1-202ENST00000366273 571 ntBASIC7.53□□□□□ -1.2
USP11P51784 MRPS6P2-201ENST00000381143 370 ntBASIC7.53□□□□□ -1.2
USP11P51784 RNU6-1215P-201ENST00000384441 102 ntBASIC7.53□□□□□ -1.2
USP11P51784 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 MTND4P20-201ENST00000424125 869 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 ELOCP8-201ENST00000439309 332 ntBASIC7.53□□□□□ -1.2
USP11P51784 ELOCP15-201ENST00000442090 332 ntBASIC7.53□□□□□ -1.2
USP11P51784 CUBNP2-201ENST00000443534 1139 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC011742.2-201ENST00000443818 352 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.53□□□□□ -1.2
USP11P51784 AC073476.1-201ENST00000452854 407 ntBASIC7.53□□□□□ -1.2
USP11P51784 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 AC005410.1-202ENST00000460347 485 ntBASIC7.53□□□□□ -1.2
USP11P51784 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.53□□□□□ -1.2
USP11P51784 FABP5P6-201ENST00000510588 409 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 HMGB1P46-201ENST00000520062 610 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC006518.2-201ENST00000542513 940 ntBASIC7.53□□□□□ -1.2
USP11P51784 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AL512310.9-201ENST00000553311 948 ntBASIC7.53□□□□□ -1.2
USP11P51784 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 AC026956.1-201ENST00000558741 396 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AC027281.1-201ENST00000574178 758 ntBASIC7.53□□□□□ -1.2
USP11P51784 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.53□□□□□ -1.2
USP11P51784 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.53□□□□□ -1.2
USP11P51784 AC024257.5-201ENST00000612739 531 ntBASIC7.53□□□□□ -1.2
USP11P51784 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 AC092656.1-203ENST00000624134 423 ntBASIC7.53□□□□□ -1.2
USP11P51784 AL356596.1-201ENST00000624230 379 ntBASIC7.53□□□□□ -1.2
USP11P51784 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.53□□□□□ -1.2
USP11P51784 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 AC132825.8-201ENST00000640783 297 ntBASIC7.53□□□□□ -1.2
USP11P51784 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USP11P51784 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.53□□□□□ -1.2
USP11P51784 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.53□□□□□ -1.2
USP11P51784 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
USP11P51784 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
USP11P51784 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.52□□□□□ -1.21
USP11P51784 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.52□□□□□ -1.21
USP11P51784 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
USP11P51784 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
USP11P51784 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.52□□□□□ -1.21
USP11P51784 SNORD116-12-201ENST00000384468 92 ntBASIC7.52□□□□□ -1.21
USP11P51784 AL136310.1-201ENST00000404926 654 ntBASIC7.52□□□□□ -1.21
USP11P51784 RN7SKP263-201ENST00000411194 309 ntBASIC7.52□□□□□ -1.21
USP11P51784 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC7.52□□□□□ -1.21
USP11P51784 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.52□□□□□ -1.21
USP11P51784 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.52□□□□□ -1.21
USP11P51784 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.52□□□□□ -1.21
USP11P51784 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.52□□□□□ -1.21
USP11P51784 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USP11P51784 Z99127.2-201ENST00000441426 334 ntBASIC7.52□□□□□ -1.21
USP11P51784 PTENP1-201ENST00000447117 1215 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms