Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.4□□□□□ -1.54
APOBEC1P41238 AL355974.3-201ENST00000617383 467 ntBASIC5.4□□□□□ -1.54
APOBEC1P41238 AC253576.2-201ENST00000618815 580 ntBASIC5.4□□□□□ -1.54
APOBEC1P41238 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
APOBEC1P41238 AP003499.2-201ENST00000624100 483 ntBASIC5.4□□□□□ -1.54
APOBEC1P41238 AC073593.1-201ENST00000624500 411 ntBASIC5.4□□□□□ -1.54
APOBEC1P41238 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.4□□□□□ -1.54
APOBEC1P41238 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
APOBEC1P41238 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.4□□□□□ -1.55
APOBEC1P41238 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
APOBEC1P41238 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.4□□□□□ -1.55
APOBEC1P41238 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
APOBEC1P41238 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.4□□□□□ -1.55
APOBEC1P41238 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
APOBEC1P41238 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.4□□□□□ -1.55
APOBEC1P41238 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.4□□□□□ -1.55
APOBEC1P41238 AC130304.1-201ENST00000622942 2385 ntBASIC5.4□□□□□ -1.55
APOBEC1P41238 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
APOBEC1P41238 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
APOBEC1P41238 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
APOBEC1P41238 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC137056.2-201ENST00000624055 1958 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 MIR130B-202ENST00000385018 82 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
APOBEC1P41238 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 RNA5SP431-201ENST00000410312 120 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 RPL35AP3-201ENST00000414680 288 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC073464.3-201ENST00000422564 712 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.39□□□□□ -1.55
APOBEC1P41238 BMS1P10-201ENST00000443754 1120 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 RPS26P24-201ENST00000497656 331 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC106806.2-201ENST00000509365 500 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC024405.1-201ENST00000532521 1042 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 HNRNPCP1-201ENST00000556181 766 ntBASIC5.39□□□□□ -1.55
APOBEC1P41238 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.39□□□□□ -1.55
APOBEC1P41238 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
APOBEC1P41238 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.39□□□□□ -1.55
APOBEC1P41238 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.39□□□□□ -1.55
APOBEC1P41238 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.39□□□□□ -1.55
APOBEC1P41238 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOBEC1P41238 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
APOBEC1P41238 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.38□□□□□ -1.55
APOBEC1P41238 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.38□□□□□ -1.55
APOBEC1P41238 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOBEC1P41238 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
APOBEC1P41238 MTHFD2P5-201ENST00000320415 844 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 SELENOWP1-201ENST00000322792 252 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
APOBEC1P41238 AL356057.1-202ENST00000402263 756 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 AC016739.1-201ENST00000405359 345 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 CBX1P3-201ENST00000413296 527 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.38□□□□□ -1.55
APOBEC1P41238 AC069154.1-201ENST00000432914 542 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 GAPDHP75-201ENST00000433910 943 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 AMYP1-201ENST00000440059 1023 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.38□□□□□ -1.55
APOBEC1P41238 BUD31P2-201ENST00000449374 300 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms