Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.18□□□□□ -1.26
RFC4P35249 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.18□□□□□ -1.26
RFC4P35249 MIR132-201ENST00000591554 101 ntBASIC7.18□□□□□ -1.26
RFC4P35249 AC104785.1-201ENST00000603220 588 ntBASIC7.18□□□□□ -1.26
RFC4P35249 AC091193.1-201ENST00000604640 448 ntBASIC7.18□□□□□ -1.26
RFC4P35249 MIR6820-201ENST00000611508 62 ntBASIC7.18□□□□□ -1.26
RFC4P35249 AL118522.2-201ENST00000616045 615 ntBASIC7.18□□□□□ -1.26
RFC4P35249 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.18□□□□□ -1.26
RFC4P35249 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFC4P35249 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RFC4P35249 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.18□□□□□ -1.26
RFC4P35249 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFC4P35249 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.18□□□□□ -1.26
RFC4P35249 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFC4P35249 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.18□□□□□ -1.26
RFC4P35249 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.18□□□□□ -1.26
RFC4P35249 AC005034.3-201ENST00000604845 1747 ntBASIC7.18□□□□□ -1.26
RFC4P35249 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFC4P35249 MAPK10-270ENST00000641102 3538 ntBASIC7.18□□□□□ -1.26
RFC4P35249 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.18□□□□□ -1.26
RFC4P35249 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFC4P35249 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RFC4P35249 AC073342.2-201ENST00000595842 1800 ntBASIC7.17□□□□□ -1.26
RFC4P35249 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFC4P35249 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFC4P35249 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 OLMALINC-203ENST00000641087 3779 ntBASIC7.17□□□□□ -1.26
RFC4P35249 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RFC4P35249 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.17□□□□□ -1.26
RFC4P35249 RN7SKP103-201ENST00000363848 320 ntBASIC7.17□□□□□ -1.26
RFC4P35249 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RFC4P35249 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 AL731534.1-201ENST00000434711 269 ntBASIC7.17□□□□□ -1.26
RFC4P35249 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.17□□□□□ -1.26
RFC4P35249 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.17□□□□□ -1.26
RFC4P35249 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.17□□□□□ -1.26
RFC4P35249 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.17□□□□□ -1.26
RFC4P35249 MRPS21P9-201ENST00000571150 257 ntBASIC7.17□□□□□ -1.26
RFC4P35249 OR7A8P-201ENST00000595427 913 ntBASIC7.17□□□□□ -1.26
RFC4P35249 AC004890.3-201ENST00000605566 1095 ntBASIC7.17□□□□□ -1.26
RFC4P35249 WBP1LP8-201ENST00000617401 327 ntBASIC7.17□□□□□ -1.26
RFC4P35249 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.17□□□□□ -1.26
RFC4P35249 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFC4P35249 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.17□□□□□ -1.26
RFC4P35249 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RFC4P35249 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFC4P35249 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.16□□□□□ -1.26
RFC4P35249 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 AP001157.1-201ENST00000550837 2339 ntBASIC7.16□□□□□ -1.26
RFC4P35249 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 RNA5SP335-201ENST00000363817 110 ntBASIC7.16□□□□□ -1.26
RFC4P35249 SNORD8-201ENST00000363915 110 ntBASIC7.16□□□□□ -1.26
RFC4P35249 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.16□□□□□ -1.26
RFC4P35249 MORF4L1P4-201ENST00000450245 976 ntBASIC7.16□□□□□ -1.26
RFC4P35249 RN7SL447P-201ENST00000494711 245 ntBASIC7.16□□□□□ -1.26
RFC4P35249 RPEP1-201ENST00000504507 658 ntBASIC7.16□□□□□ -1.26
RFC4P35249 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.16□□□□□ -1.26
RFC4P35249 RNA5SP228-201ENST00000516232 133 ntBASIC7.16□□□□□ -1.26
RFC4P35249 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.16□□□□□ -1.26
RFC4P35249 AC126615.2-201ENST00000553003 515 ntBASIC7.16□□□□□ -1.26
RFC4P35249 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 OR1F2P-201ENST00000570470 933 ntBASIC7.16□□□□□ -1.26
RFC4P35249 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 AC100827.5-201ENST00000615883 426 ntBASIC7.16□□□□□ -1.26
RFC4P35249 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.16□□□□□ -1.26
RFC4P35249 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 FBXL21-201ENST00000297158 1305 ntBASIC7.16□□□□□ -1.26
RFC4P35249 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFC4P35249 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
RFC4P35249 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RFC4P35249 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RFC4P35249 RNA5SP305-201ENST00000362665 119 ntBASIC7.15□□□□□ -1.26
RFC4P35249 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RFC4P35249 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RFC4P35249 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.15□□□□□ -1.26
RFC4P35249 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.15□□□□□ -1.26
RFC4P35249 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.15□□□□□ -1.26
RFC4P35249 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.15□□□□□ -1.26
RFC4P35249 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 AC096754.1-201ENST00000508904 818 ntBASIC7.15□□□□□ -1.26
RFC4P35249 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.15□□□□□ -1.26
RFC4P35249 AP000676.2-201ENST00000529711 301 ntBASIC7.15□□□□□ -1.26
RFC4P35249 AC078878.1-201ENST00000539832 958 ntBASIC7.15□□□□□ -1.26
RFC4P35249 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms