Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC022400.9-201ENST00000623633 273 ntBASIC5.9□□□□□ -1.46
PTPN3P26045 AC000095.2-202ENST00000637415 154 ntBASIC5.9□□□□□ -1.46
PTPN3P26045 OR8A1-204ENST00000642111 1145 ntBASIC5.9□□□□□ -1.46
PTPN3P26045 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTPN3P26045 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN3P26045 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN3P26045 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.9□□□□□ -1.47
PTPN3P26045 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN3P26045 AC138907.8-201ENST00000623981 2256 ntBASIC5.9□□□□□ -1.47
PTPN3P26045 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTPN3P26045 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 OR7E25P-201ENST00000344844 931 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 AC107977.1-201ENST00000355745 939 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 CDY17P-201ENST00000414121 1282 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN3P26045 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 RPL24P2-201ENST00000421023 475 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 AC019205.1-201ENST00000421830 730 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 VN1R21P-201ENST00000426703 765 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 BX323845.3-201ENST00000428215 527 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 CDY8P-201ENST00000428380 1279 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 PCBP2P1-201ENST00000437262 977 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 RAB9AP5-201ENST00000437794 597 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 RAB9AP2-201ENST00000443911 597 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 CDY20P-201ENST00000447528 1279 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 OR7E116P-201ENST00000448529 957 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 AC128716.1-201ENST00000475129 166 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 RN7SKP70-201ENST00000516655 271 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 SNORA81.2-201ENST00000516868 170 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 AC139365.2-201ENST00000517972 253 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 AC068305.2-201ENST00000550567 1205 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN3P26045 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.89□□□□□ -1.47
PTPN3P26045 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 AC022919.1-201ENST00000624979 626 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.89□□□□□ -1.47
PTPN3P26045 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN3P26045 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN3P26045 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PTPN3P26045 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
PTPN3P26045 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PTPN3P26045 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN3P26045 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN3P26045 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN3P26045 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PTPN3P26045 RNA5SP514-201ENST00000363717 111 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 RN7SKP275-201ENST00000364626 301 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 SUGT1P2-201ENST00000379452 992 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 RN7SKP17-201ENST00000411242 351 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN3P26045 HMGB1P32-201ENST00000425971 565 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 AC126120.1-201ENST00000431082 470 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PTPN3P26045 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN3P26045 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 AC090058.1-201ENST00000498788 435 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 AC114781.3-201ENST00000512083 142 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 BCAS2P1-201ENST00000528022 632 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN3P26045 HMGN2P36-201ENST00000529541 409 ntBASIC5.88□□□□□ -1.47
PTPN3P26045 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms