Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.62□□□□□ -1.67
CCL3L1P16619 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.62□□□□□ -1.67
CCL3L1P16619 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.62□□□□□ -1.67
CCL3L1P16619 AL512356.3-201ENST00000623005 461 ntBASIC4.62□□□□□ -1.67
CCL3L1P16619 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCL3L1P16619 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.62□□□□□ -1.67
CCL3L1P16619 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCL3L1P16619 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CCL3L1P16619 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.62□□□□□ -1.67
CCL3L1P16619 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCL3L1P16619 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCL3L1P16619 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.62□□□□□ -1.67
CCL3L1P16619 LINC02019-201ENST00000608605 2060 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AC015799.1-201ENST00000622996 3122 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 RNA5SP122-201ENST00000384457 108 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCL3L1P16619 RN7SKP286-201ENST00000410894 299 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AL133173.1-201ENST00000423458 397 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 OR10T1P-201ENST00000424327 947 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC104843.2-201ENST00000427666 297 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 NANOGP9-201ENST00000439890 892 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AL450996.1-201ENST00000445574 1202 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 VDAC2P4-201ENST00000452925 711 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 SETP20-201ENST00000457046 852 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 NXT1P1-201ENST00000458481 316 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC084824.2-201ENST00000548906 345 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.61□□□□□ -1.67
CCL3L1P16619 RBM22P12-201ENST00000567098 1255 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 MIR4505-201ENST00000582238 73 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 MIR4310-201ENST00000582950 57 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC009237.12-201ENST00000604755 742 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 AL357153.4-201ENST00000620487 1016 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCL3L1P16619 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCL3L1P16619 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCL3L1P16619 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCL3L1P16619 HSPD1P7-201ENST00000447985 1686 ntBASIC4.61□□□□□ -1.67
CCL3L1P16619 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCL3L1P16619 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
CCL3L1P16619 AL162456.1-201ENST00000634535 2006 ntBASIC4.6□□□□□ -1.67
CCL3L1P16619 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.6□□□□□ -1.67
CCL3L1P16619 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCL3L1P16619 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.6□□□□□ -1.67
CCL3L1P16619 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.6□□□□□ -1.67
CCL3L1P16619 SNORA17A-201ENST00000391185 133 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms