Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NCK1P16333 RNA5SP198-201ENST00000410376 127 ntBASIC5.32□□□□□ -1.56
NCK1P16333 RN7SKP29-201ENST00000410957 272 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AL354890.1-201ENST00000413730 346 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 DPPA2P2-201ENST00000418220 897 ntBASIC5.32□□□□□ -1.56
NCK1P16333 BX119904.3-201ENST00000428194 957 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AC108479.1-201ENST00000431142 427 ntBASIC5.32□□□□□ -1.56
NCK1P16333 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 AL022324.2-201ENST00000434827 780 ntBASIC5.32□□□□□ -1.56
NCK1P16333 PCBP2P1-201ENST00000437262 977 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.32□□□□□ -1.56
NCK1P16333 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 UBFD1P1-201ENST00000473259 814 ntBASIC5.32□□□□□ -1.56
NCK1P16333 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.32□□□□□ -1.56
NCK1P16333 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.32□□□□□ -1.56
NCK1P16333 AC138517.1-201ENST00000515724 568 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 RN7SKP253-201ENST00000516424 309 ntBASIC5.32□□□□□ -1.56
NCK1P16333 RNA5SP441-201ENST00000516809 88 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.32□□□□□ -1.56
NCK1P16333 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 AC079064.1-201ENST00000528365 362 ntBASIC5.32□□□□□ -1.56
NCK1P16333 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 AC234775.3-201ENST00000564612 656 ntBASIC5.32□□□□□ -1.56
NCK1P16333 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 AC015819.1-201ENST00000613588 663 ntBASIC5.32□□□□□ -1.56
NCK1P16333 MIR6823-201ENST00000622118 61 ntBASIC5.32□□□□□ -1.56
NCK1P16333 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.32□□□□□ -1.56
NCK1P16333 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 AC011503.2-201ENST00000594230 1500 ntBASIC5.32□□□□□ -1.56
NCK1P16333 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.32□□□□□ -1.56
NCK1P16333 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NCK1P16333 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.32□□□□□ -1.56
NCK1P16333 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 AL034549.2-201ENST00000618285 3373 ntBASIC5.31□□□□□ -1.56
NCK1P16333 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 U3.23-201ENST00000391132 200 ntBASIC5.31□□□□□ -1.56
NCK1P16333 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AL133260.1-201ENST00000405720 405 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.31□□□□□ -1.56
NCK1P16333 NIFKP3-201ENST00000417799 865 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC117434.1-201ENST00000419971 836 ntBASIC5.31□□□□□ -1.56
NCK1P16333 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.31□□□□□ -1.56
NCK1P16333 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 SUMO2P4-201ENST00000504193 276 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 Vault.2-201ENST00000516519 98 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC008126.1-201ENST00000549019 480 ntBASIC5.31□□□□□ -1.56
NCK1P16333 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 AL359219.2-201ENST00000555184 348 ntBASIC5.31□□□□□ -1.56
NCK1P16333 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
NCK1P16333 HMGN1P26-201ENST00000558737 303 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 AC016839.1-201ENST00000578162 867 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC096586.2-201ENST00000610260 441 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC022960.2-201ENST00000616300 666 ntBASIC5.31□□□□□ -1.56
NCK1P16333 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 FAM27E2-201ENST00000619668 403 ntBASIC5.31□□□□□ -1.56
NCK1P16333 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NCK1P16333 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NCK1P16333 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NCK1P16333 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCK1P16333 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NCK1P16333 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms