Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 AC027575.3-201ENST00000583058 2747 ntBASIC6.54□□□□□ -1.36
COL6A2P12110 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.54□□□□□ -1.36
COL6A2P12110 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL6A2P12110 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 AC123769.1-201ENST00000530992 3192 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 RN7SKP257-201ENST00000364525 309 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 Y_RNA.505-201ENST00000384489 102 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 MIR99A-201ENST00000384906 81 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 RNA5SP176-201ENST00000390956 110 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AC092638.1-201ENST00000411966 1275 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AL662791.3-201ENST00000413771 776 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 ELOCP9-201ENST00000418624 239 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AL359633.1-201ENST00000421403 310 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 DSTNP5-201ENST00000427921 523 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 SNRPBP1-201ENST00000443634 282 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.53□□□□□ -1.36
COL6A2P12110 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 RPL26P30-201ENST00000453533 435 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 OR52H2P-201ENST00000514607 902 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 RNU5A-4P-201ENST00000516588 111 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 AP005639.1-201ENST00000526939 192 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC011611.5-201ENST00000552477 578 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 SETP1-201ENST00000556014 845 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC090695.1-201ENST00000561269 1222 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 ANP32BP1-202ENST00000568553 737 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.53□□□□□ -1.36
COL6A2P12110 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.53□□□□□ -1.36
COL6A2P12110 DPRXP5-201ENST00000604662 539 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 AL138960.1-201ENST00000613838 513 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC007671.2-201ENST00000637344 619 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 TRIM53CP-201ENST00000531490 1354 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
COL6A2P12110 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL6A2P12110 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.53□□□□□ -1.36
COL6A2P12110 AC105235.1-201ENST00000623208 1816 ntBASIC6.53□□□□□ -1.36
COL6A2P12110 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
COL6A2P12110 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 AC093909.5-201ENST00000621839 1799 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 AC053481.2-202ENST00000582394 1500 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
COL6A2P12110 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 OR13C3-201ENST00000374781 1108 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL6A2P12110 RNU6-224P-201ENST00000384055 107 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 SNORD116-4-201ENST00000384733 96 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms