Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RN7SKP279-201ENST00000411383 298 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC072052.1-201ENST00000496556 306 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 HMGB1P44-201ENST00000508597 572 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 AC021106.1-201ENST00000509020 1058 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 AC147055.3-201ENST00000510547 851 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 AP000676.2-201ENST00000529711 301 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 AC005225.5-201ENST00000623547 2225 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 AC010329.1-201ENST00000593903 8328 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 U3.28-201ENST00000391249 210 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 U3.36-201ENST00000408418 213 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 GAPDHP25-201ENST00000447061 1001 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 AZGP1P2-201ENST00000454506 345 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 RPL7P39-201ENST00000481157 744 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 RPL15P21-201ENST00000495592 567 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.29□□□□□ -1.4
COL11A1P12107 MIR4436B2-201ENST00000581415 91 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 MIR4436B1-201ENST00000583272 91 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 Mico1.1-201ENST00000611698 204 ntBASIC6.29□□□□□ -1.4
COL11A1P12107 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL11A1P12107 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
COL11A1P12107 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL11A1P12107 AL033543.1-201ENST00000623440 13454 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 AC007938.2-201ENST00000604666 2634 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 AL133325.1-201ENST00000421090 382 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 PSMD10P3-201ENST00000437000 448 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 Z80107.2-201ENST00000445127 392 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.28□□□□□ -1.4
COL11A1P12107 AC115223.1-201ENST00000466377 870 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 IGLV2-34-201ENST00000490007 283 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.28□□□□□ -1.4
COL11A1P12107 OR11H3P-201ENST00000554547 982 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.28□□□□□ -1.4
COL11A1P12107 AC135068.5-201ENST00000624197 983 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 AL117378.2-201ENST00000622916 1337 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.28□□□□□ -1.4
COL11A1P12107 Z82209.2-201ENST00000623410 2012 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 AC068870.1-201ENST00000563737 2455 ntBASIC6.28□□□□□ -1.4
COL11A1P12107 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL11A1P12107 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL11A1P12107 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL11A1P12107 RNU1-43P-201ENST00000365052 165 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 DBIP1-201ENST00000401435 260 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 AL121977.1-201ENST00000401636 979 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.27□□□□□ -1.41
COL11A1P12107 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.27□□□□□ -1.41
COL11A1P12107 RPL7P45-201ENST00000455851 743 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 AC079080.1-201ENST00000479841 822 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.27□□□□□ -1.41
COL11A1P12107 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
COL11A1P12107 AC090527.3-201ENST00000619041 548 ntBASIC6.27□□□□□ -1.41
COL11A1P12107 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.27□□□□□ -1.41
COL11A1P12107 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.27□□□□□ -1.41
COL11A1P12107 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL11A1P12107 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.27□□□□□ -1.41
COL11A1P12107 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL11A1P12107 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL11A1P12107 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.27□□□□□ -1.41
COL11A1P12107 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL11A1P12107 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms